Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1229 |
Symbol | |
ID | 5370608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 1470409 |
End bp | 1472643 |
Gene Length | 2235 bp |
Protein Length | 744 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640829428 |
Product | phosphoenolpyruvate-protein phosphotransferase PtsP |
Protein accession | YP_001365443 |
Protein GI | 152999762 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3605] Signal transduction protein containing GAF and PtsI domains |
TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00679774 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTAAATA CGCTTAGGGA TATTACTCAG GCTGTGGCAT CTGCCCACAG TTTGGAAACC GCATTAGAAG TCTTAGTCTC ATCGACTAAA GCGGCGATGG AAACCCAATG TTGCTCCATC TATATCCTAG AAGAGCAAGA ACTGGTGTTA TCTGCAACCG ACGGTCTTGA AAAAAGCGCC GTTGGTCGGG TACGTATGCC ACTGACCGAA GGTTTAGTGG GACTCGCAGC CCAGCGGGAA GAGGCCGTTA ACCTAGCGGA TGCACGGCTT CATCCCAGAT TCAAACTTTT CCCTGAAGTC GCCGAAGAAG AATACCGCGC CTTTCTAGCC GTACCTATCA TCTACCAGAA AGCCGTGGTC GGGGTGATAG TGGTTCAGCA GGCGAGTGCT CGCCAATTCA GTGAGGGCGA AGAAGCCTTC CTGATGACGC TCGCCGCCCA GTTAGCAATG GCGGTGCGCG GCTTAAAACA AAAAGCCCAA GTCAGTTCCC ATCATCAACA AATTCTATTT CAAGGTACGT CGGCGTCAAA CGGTATCGCC ATTGCGTATG CCTTTGTGCT CGGTGGAGAG ATCCCCCTTG AGCAGCCCGA CGTGCGCTCT GACGATATTG CCTATGAGTC GAGCCGTTTA ACGACGGCTA TGGTGCGTTG TAAAGAAGCA ATTGGCGCTT TATCTCAGCG GTTTGATCGT GAGCAAGATG ATGAAGTCGT CTCTATTTTC AATGCATTAC AGTTATTACT TGATGACGCC AGTTTAGGCG GCGAGTATGC CCGTGAGGTG CAATTAGGTT GGGCCGCTGA ATCGGCGGTG AGCCGAGTGT CTTTGCGTTA TATTCAGCAA TTCTTGGCGA TGGAAGATCC TTATCTTAAG GAGCGGGCAA GCGATATCCG CGACTTAGGC CAAAAAGTAT TGCGCCAGCT GATTGAGCCA GAGCGTTTAG AGCTTGAACC CGATAAACCT GTAATTTTAA TTACCCGCGA AGCCGATGCG ACTATGTTGG CTGAGTTCCC AAGACAAAAA CTCGCGGGGA TTGTCACTGA GCTTGGCGGC GTAAACTCCC ATGCCGCTAT TTTAGCCCGC GCCTTAGGTG TGCCGGCCAT TACCGGTGTA GAACAACTAT TATCCGCCAA TATTGACCAG AAGCTTTTAG TGGTGAACGC GAGCCGTGGC CAGCTATTGG TGTCGCCATC ACCGGCGATT GTTGGTGAGT ATCGCAGCTT AATTTCGGCG CAAAAAGCGC TGCAACGCCA GTATGCTCAA GAATTAGCAC TGCCTTCTGT TACCCTCGAC GGCTCACGTA TTCGTTTGTA TTTAAATGCG GGCTTACTCA GCGGCGTGGC TTCTGAAATT GCCGAAGGTG CCGACGGGAT TGGGCTGTAT CGCACCGAAA TCCCTTTTAT GCTGCAACAA CGTTTCCCGA GTGAATCTGA GCAAGTGAAA GTGTATCAAC AGGTCTTGTC GGCGGCGTCT GGTCGACCTG TGGTGATGCG CACTTTGGAT GTTGGCGGCG ATAAACCTCT GCCGTATTTC CCAATTAAAG AAGATAATCC TTTCCTTGGT TGGCGCGGGA TCCGTTTGTC GCTGGATCAT CCTGAGCTAT TTTTGGTGCA GTTACGGGCC ATGTTGCAGG CGGGTGGAGA TGGTAAGCAA TTAAGTATTT TGCTGCCCAT GGTCAGTAAC TTAGATGAAA TCGATCAATC CTTAGAATAT CTGCAGCAAG CCTATGTCGA ACTTAAAAAT GATGTAAACA GCAACATAGT GATGCCACGC ATCGGCATTA TGCTTGAAGT GCCGGCGATG TTGTATCAAT TGGATGATGT GGCAAAACGG GTGGATTTTG TCTCCGTTGG CAGTAATGAC TTAACCCAGT ATTTGCTTGC GGTTGACCGT AACAATCCGC GGGTAAGCTC ATTATTTGAC AGTTATCATC CGGGAATACT GCGGGCTTTG CATCAGGCTC ACTTAGATTG TCGATATCAT AAGCTCGATA TCAGTATTTG TGGCGAGTTA GCGGGCGAGC CTATGGGCGC CATTTTGTTG GTGGCCATGG GATACGATCA ATTGAGTATG AATCAGGGTA GTTTAGCGCG GATCAATTAT CTCTTGCGCC GTGTCGCACG GGCCGATTTA GATCAATTGC TTGCTAAAGC CTTGAGCCTA TCAAATGGCT TCCAAGTGCG CGAGCTGGTT AAAGAATATT TGAACCAGCA AGGTCTCTCA ACAATTCTTA ATTAA
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Protein sequence | MLNTLRDITQ AVASAHSLET ALEVLVSSTK AAMETQCCSI YILEEQELVL SATDGLEKSA VGRVRMPLTE GLVGLAAQRE EAVNLADARL HPRFKLFPEV AEEEYRAFLA VPIIYQKAVV GVIVVQQASA RQFSEGEEAF LMTLAAQLAM AVRGLKQKAQ VSSHHQQILF QGTSASNGIA IAYAFVLGGE IPLEQPDVRS DDIAYESSRL TTAMVRCKEA IGALSQRFDR EQDDEVVSIF NALQLLLDDA SLGGEYAREV QLGWAAESAV SRVSLRYIQQ FLAMEDPYLK ERASDIRDLG QKVLRQLIEP ERLELEPDKP VILITREADA TMLAEFPRQK LAGIVTELGG VNSHAAILAR ALGVPAITGV EQLLSANIDQ KLLVVNASRG QLLVSPSPAI VGEYRSLISA QKALQRQYAQ ELALPSVTLD GSRIRLYLNA GLLSGVASEI AEGADGIGLY RTEIPFMLQQ RFPSESEQVK VYQQVLSAAS GRPVVMRTLD VGGDKPLPYF PIKEDNPFLG WRGIRLSLDH PELFLVQLRA MLQAGGDGKQ LSILLPMVSN LDEIDQSLEY LQQAYVELKN DVNSNIVMPR IGIMLEVPAM LYQLDDVAKR VDFVSVGSND LTQYLLAVDR NNPRVSSLFD SYHPGILRAL HQAHLDCRYH KLDISICGEL AGEPMGAILL VAMGYDQLSM NQGSLARINY LLRRVARADL DQLLAKALSL SNGFQVRELV KEYLNQQGLS TILN
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