Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1221 |
Symbol | gltD |
ID | 5369531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 1458078 |
End bp | 1459484 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640829420 |
Product | glutamate synthase subunit beta |
Protein accession | YP_001365435 |
Protein GI | 152999754 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAACG ATTTTCAATT TATTGAAGTG GGTCGCAAAG ACCCCACCAA ACACCCTGCA GCTAAACGTG CGACTCAGTT TATTGAGATT TATCAGCCTT TTGCTCAGCC TGAAGTGGCA CAGCAAGCGG ATCGCTGTTT AGATTGCGGC AATCCTTATT GTGAGTGGAA ATGTCCGCTA CACAATTATA TTCCTAACTG GCTCAAGCTA GCGGAGCAAG GTCGCATCAT GGAAGCGGCG GATTTAGTGC ATGAGACCAA CACTCTGCCC GAAATCTGCG GCCGTGTTTG TCCACAGGAC AGACTCTGTG AAGGCGCTTG TACCCTTAAC GACGACTTTG GCGCTGTCAC TATCGGTAAT GTCGAAAAAT ACATTACCGA CACAGCCATC GCCCAAGGCT GGCGCCCCGA TATGAGCAAG GTCACGCCAC GCCCTGAACG AGTGGCAATT GTCGGTGCGG GTCCTGCGGG TTTAGGCTGC GCGGATATTC TGTCTCGTAA CGGTGTTAAA GCTGTGGTCT TTGATAAATA TCCACAAATT GGTGGCCTGC TCACCTACGG TATTCCGTCT TTTAAGCTCG ACAAGGCCGT CATGGCGACC CGTCGCAGTG TATTAGAAGG CATGGGTATT GAGTTCAAAC TCGGGGTTAC TGTCGGTAAA GACATCCCAT TTACTAAACT GCTCGAAGAA TACGATGCAG TATTCCTTGG TATGGGCACC TATACCGCGA TGAAAGCGGG CCTTGAGGGT GAAGATGCCC AAGGCGTATA CCAAGCCCTG CCCTATTTGA TTGGTAATAC CCACCATTTA ATGGGCACTC AAGATGCGCA AACGCCCTAC CTGAACCTTG AAGGTAAACG TGTGGTGGTG TTAGGCGGTG GTGATACTGC GATGGATTGC GTGCGCACAG CCGTCAGACA AGGTGCCAGC AGCGTAGTCT GTGCTTACCG CCGAGACGAG GCCAACATGC CGGGTTCACG CCGCGAAGTG CAAAATGCAC GGGAGGAAGG GGTTGATTTC CTGTTTAACC GTCAACCTGT GGCGATTAAA ACCCAAGATG GCAAAGTAGT CGGCATTGAA TGCGTCGAAA CCGCCATGGG TAAAGCCGAT GCCAGTGGTC GTCAACGCGC CGAAGCTATT GCGGGTAGCG AACAGTTGCT CGAAGCCGAT GCGATTATTA TTGCTTTCGG TTTCCAACCT AGCCCAGCAC CTTGGTTTGC CGACCATGGC ATCGAGCTCG ATCAATGGGG CCGAGTTAAA GCGAGTAAGT TAGACGGAAA TCCTTTCCAA ACCACCAACC CAAAAGTGTT TGCTGGTGGT GATATGGTGC GCGGTTCTGA CTTAGTCGTG ACAGCCATTG CCGAAGGTCG CGATGCTGCT CAAGGTATTC TTAACTACTT AGACTAA
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Protein sequence | MSNDFQFIEV GRKDPTKHPA AKRATQFIEI YQPFAQPEVA QQADRCLDCG NPYCEWKCPL HNYIPNWLKL AEQGRIMEAA DLVHETNTLP EICGRVCPQD RLCEGACTLN DDFGAVTIGN VEKYITDTAI AQGWRPDMSK VTPRPERVAI VGAGPAGLGC ADILSRNGVK AVVFDKYPQI GGLLTYGIPS FKLDKAVMAT RRSVLEGMGI EFKLGVTVGK DIPFTKLLEE YDAVFLGMGT YTAMKAGLEG EDAQGVYQAL PYLIGNTHHL MGTQDAQTPY LNLEGKRVVV LGGGDTAMDC VRTAVRQGAS SVVCAYRRDE ANMPGSRREV QNAREEGVDF LFNRQPVAIK TQDGKVVGIE CVETAMGKAD ASGRQRAEAI AGSEQLLEAD AIIIAFGFQP SPAPWFADHG IELDQWGRVK ASKLDGNPFQ TTNPKVFAGG DMVRGSDLVV TAIAEGRDAA QGILNYLD
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