Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1189 |
Symbol | |
ID | 5373783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 1427185 |
End bp | 1428909 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640829388 |
Product | DNA primase |
Protein accession | YP_001365403 |
Protein GI | 152999722 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0497692 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAATAC CTCGTGATTT TATCAATGAG CTAATCGCTC GCACTGACAT AGTCGAACTT ATCGATCGTA AGGTGCCCTT GAAAAAGGCG GGTAAGAACT ACTCGGCCTG TTGTCCTTTT CATAGCGAAA AATCACCTTC GTTTACCGTC AGCCGTGATA AACAGTTCTA TCATTGCTTT GGCTGCGGTG CTCACGGCAA CGCCATCGAT TTTGTGATGG AGTATGACCG ACTCGATTTT ATTGATGCCA TTGAAGATTT GGCGGGCCAG CTTGGATTAG AGGTTCCCAG AGAACAAGGC ACAGGCAAGC GACATGATGA CGGTTTAAGT CGTGACTTAT ACCAACTCAT GGAAGAAGCG AGCCTTTACT TTCAAAACCA ACTTAGACAA CACCAAGATA AACAAAAAGT TATCGATTAT CTTGCCTATC GCGGTTTATC CGATGATGTA GTCGAACATT TTGGTATTGG CTTTGCGCCA GACGGTTGGG ACGGCTTATT GGGCCGCTAT CGTCAGAATC AAGATGCGCA GGATAAGTTA CTGACTGCTG GTATGTTAAT AAGCAACGAC AGTGGGAAAC GTTACGACAG ATTTCGTGAC CGCCTCATGT TTCCTATCCG CGACAGACGC GGACGAGTCA TTGGTTTTGG TGGCAGAGTT TTAGGTGATG GCACACCCAA ATACTTGAAT TCTCCAGAAA CGCCCATATT TCATAAGGGC AATGAGCTTT ATGGTCTCTA TGAACTAAAG CAACGCTATC GCGATCCTGA CAAAGTACTG ATCGTTGAAG GCTATATGGA TGTGGTGGCG TTGGCGCAAT TTGGCGTCGA TTATGCCGTA GCGTCATTAG GCACCTCGAC GACGGCGGAG CAATTTCAGC TTTTGCTGCG CAGCGCTAAA GAAGTGGTTT GCTGTTACGA CGGCGACAGA GCGGGTACTG AAGCGGCTTG GCGTGCCTTA GAAACGGCAT TGCCATTATT AAAGCCAGGC GATCAAGTGC GATTTATGTT CCTGCCTCAG GCCGAAGATC CTGATTCTAT GGTACGTAAG ATTGGTAAAG ATTCATTTGA AACCTTAATG GTTTCAGCCA TTGCACTACC CGAGTTTCTG TTTGATACGT TAGCGACAAA ATACGGTACA GATAAAGGCA ACTTAGCGAA ACAAGCTTTT ATCTTAATTG AAAAAATTCA AGACACTGTG CTGCAAAATT TACTGCTTGA GAACTTAGCT CACAAGTTAG GAATGAACAG CTCAGAAGAT ATGAAAAAGA AGCTAGGCTT TAGCGTGAAA CAAGCTAAAC CAATGGCAAA TAAAGGATTA AAAGGACGCG GTACACCATT GCGACTCGCC ATCGCACTGC TAGTACAACA TCCTAAACTG GGTATGGGCT TACCTCCACA ACCCGCACTC GCCCACTTGC AGATGCCAGG CATAGAATTG CTGCCACTGT TATTGGAGAT GACTCGAGAG CAAACGTTAA ACAGCGCACA ACTACTTGAA CAATTCAGAG AGCACCCTTA CAGCGGCACT CTCCATAAAT TGGCCCAATG GGACCATCAA GTGGCGGATG AAAACTTGCT CGAAAAGTTT AAACAAACCC TGGTTTGGTT GAACAATCAA TATATTGAAC AACGATATCA GGAATTGAGT CTAAAACAGA CTCATACTAA AGAAGAGAAG ATGCAGCTCT CGAAGCTGAT CTCAGTCATG AAAGGGTTAA ACTGA
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Protein sequence | MAIPRDFINE LIARTDIVEL IDRKVPLKKA GKNYSACCPF HSEKSPSFTV SRDKQFYHCF GCGAHGNAID FVMEYDRLDF IDAIEDLAGQ LGLEVPREQG TGKRHDDGLS RDLYQLMEEA SLYFQNQLRQ HQDKQKVIDY LAYRGLSDDV VEHFGIGFAP DGWDGLLGRY RQNQDAQDKL LTAGMLISND SGKRYDRFRD RLMFPIRDRR GRVIGFGGRV LGDGTPKYLN SPETPIFHKG NELYGLYELK QRYRDPDKVL IVEGYMDVVA LAQFGVDYAV ASLGTSTTAE QFQLLLRSAK EVVCCYDGDR AGTEAAWRAL ETALPLLKPG DQVRFMFLPQ AEDPDSMVRK IGKDSFETLM VSAIALPEFL FDTLATKYGT DKGNLAKQAF ILIEKIQDTV LQNLLLENLA HKLGMNSSED MKKKLGFSVK QAKPMANKGL KGRGTPLRLA IALLVQHPKL GMGLPPQPAL AHLQMPGIEL LPLLLEMTRE QTLNSAQLLE QFREHPYSGT LHKLAQWDHQ VADENLLEKF KQTLVWLNNQ YIEQRYQELS LKQTHTKEEK MQLSKLISVM KGLN
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