| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1124 |
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| Symbol | ispH |
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| ID | 5370687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1337487 |
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| End bp | 1338443 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640829323 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_001365339 |
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| Protein GI | 152999658 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTCG ATCCTACCAG CCCAAGTTTG AATATTATGC TCGCGAACCC GCGTGGTTTT
TGTGCGGGTG TTGATCGTGC TATCAGTATT GTAGAACGGG CGTTGGAATT GTTTTCACCG
CCTATCTATG TTCGCCATGA AGTCGTACAT AATCGCTATG TCGTGCAGAA TCTGAAGGAT
CGCGGTGCGG TTTTTGTCGA AGAGTTAGAT CAAGTGCCGG ATAACAACAT TGTTATCTTC
AGTGCTCATG GTGTCTCTCA AGCGGTGAGA CAAGAAGCTA AGGCGCGCGG CTTGAGAGTT
TTCGATGCGA CATGTCCCTT AGTGACCAAA GTGCACCTTC AAGTGACGCG TGCAAGCCGT
AAAGGTATTG AATGTATCTT AATTGGGCAT GAAGGACACC CTGAAGTCGA GGGGACTATG
GGTCAATACG ATAATCCTAA CGGCGGCGTT TATCTGATTG AATCGCCTGC TGATGTGGAT
GCGCTAGAAG TGCGCGACCC TAACAATCTC TGCTTCGTGA CCCAAACAAC CTTATCTGTC
GATGATACGT TAGATATTAT TGCCGCGTTA CAAAAAAGGT TTCCTTCAAT TGAAGGACCC
CGCAAAGACG ATATTTGTTA TGCAACACAG AATCGTCAAG ATGCAGTACG TAATCTATCT
GCGGATGTGG ATTTGTTGAT TGTTGTTGGT TCAAAAAACA GCTCTAACTC TAATCGGTTA
CGCGAGCTCG CATTGAAGAC CGGAACTCAG TCTTATCTGG TGGATACTGC TGACGATGTT
GAATCAAGCT GGTTCGATAA TGTTTCGCGT GTTGCTGTTA CCGCAGGCGC TTCTGCACCT
GAGGTCTTAG TTCAACAAGT TGTCCAAGCG ATTGCAAAAC TCGCCCCTAG CGTGGTAACT
GAAATCGAAG GCCGTAAGGA AGACACTGTC TTTGCGGTGC CTGCCGAACT GCGCTAA
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| Protein sequence | MKLDPTSPSL NIMLANPRGF CAGVDRAISI VERALELFSP PIYVRHEVVH NRYVVQNLKD
RGAVFVEELD QVPDNNIVIF SAHGVSQAVR QEAKARGLRV FDATCPLVTK VHLQVTRASR
KGIECILIGH EGHPEVEGTM GQYDNPNGGV YLIESPADVD ALEVRDPNNL CFVTQTTLSV
DDTLDIIAAL QKRFPSIEGP RKDDICYATQ NRQDAVRNLS ADVDLLIVVG SKNSSNSNRL
RELALKTGTQ SYLVDTADDV ESSWFDNVSR VAVTAGASAP EVLVQQVVQA IAKLAPSVVT
EIEGRKEDTV FAVPAELR
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