| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1106 |
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| Symbol | |
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| ID | 5372117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1316404 |
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| End bp | 1317009 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640829305 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001365321 |
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| Protein GI | 152999640 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.59449 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGCATTAG CAATACCGCA ATTACCAACC CATGAGCACT CAGATGAGCA ATTGATGTTG
TGCTATGCCA AGGGCGATTC AAAAGCATTT GAGCAGTTAT ACCTGAAGCA CAAAGGCGCG
CTTTATCGCT ACTTTGTGCG CCAGTTAGGT GATAAGCAGT TAGCTGAGGA TTTATATCAA
GAAACTTGGG GACGGGTGAT CCGCGCAGCG GCTAACTACG AGGCCAGTGC TAAGTTTACT
ACTTGGCTAT ATCGTATCGC CCATAACTTA TTGATTGATC ATGTGCGAGC GGTTAAGCCC
GTCGATTTAG TCGCCACTGA TGAGGACGAA ACTGGGCTCG ATACTTTTGT GGCGGGTGAG
CAAGATAAGC CCGACGTGCA GTGGCAAGAA GCGCAAAAGA GTTTATTGCT AAAGACCTGT
ATCGCACTGT TACCCCAAGT CCAGAAAGAG GCATTTATCC TGAACATTGA AATGGGTTTT
ACGGCTGCCA TCATTAGCGA CATTGCGGGC GTGACTTTAG AAGCGACTAA GAGCCGTATT
CGCTACGCTT ACCAAAGTCT AAAGGATTGC GTTAGCGCGA AATGGCAGGA GGCGGGTCAT
GAGTAA
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| Protein sequence | MALAIPQLPT HEHSDEQLML CYAKGDSKAF EQLYLKHKGA LYRYFVRQLG DKQLAEDLYQ
ETWGRVIRAA ANYEASAKFT TWLYRIAHNL LIDHVRAVKP VDLVATDEDE TGLDTFVAGE
QDKPDVQWQE AQKSLLLKTC IALLPQVQKE AFILNIEMGF TAAIISDIAG VTLEATKSRI
RYAYQSLKDC VSAKWQEAGH E
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