Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1089 |
Symbol | |
ID | 5372815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 1288861 |
End bp | 1289328 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640829285 |
Product | hypothetical protein |
Protein accession | YP_001365304 |
Protein GI | 152999623 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000000360525 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAAAG TGAACACGTT CAGCACTATG CTATGCCGAT GGTTTTGGCT CGGCCTTTTC ATTGGCCCCG TTTCTGCGGG CGTTATCTAT ACTTGGGTCG ACGAAAATGG GGTGACGCAT TACAGCCAAC AAGCCCCGCA ACAAGAAAAC ATCAAAGCAG AAAAACTCTA CAGTGAAGAT TTAGAGCAGG CGAAAGTGGG TTTTATCGCA CCGGTAAAGA AAGCGGAAGC CACTTCTGAA GCCAATCAAT TAGAAAAGTC AGCGGCGCTG ATTAAAGAGA AAGATGCTAA ACAGGCTCAA TCCATTTGTG AGAGTGCAAA ACACAATTTA GATATTCTCA CGACGCACAC TAAGCTTATC CGCCAAACTT CCGATTCGGG TGAATCTGTC GCTATGACAG AGGAAGACCG CCAAGCCTCG ATTGCCCAGC AGCAGGAAAG AATCAAACTC TTCTGTGATA AGAAGTAG
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Protein sequence | MLKVNTFSTM LCRWFWLGLF IGPVSAGVIY TWVDENGVTH YSQQAPQQEN IKAEKLYSED LEQAKVGFIA PVKKAEATSE ANQLEKSAAL IKEKDAKQAQ SICESAKHNL DILTTHTKLI RQTSDSGESV AMTEEDRQAS IAQQQERIKL FCDKK
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