| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1070 |
|---|
| Symbol | |
|---|
| ID | 5370307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 1268919 |
|---|
| End bp | 1270187 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640829263 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001365285 |
|---|
| Protein GI | 152999604 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000000572613 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAACGTC TCTTTATCAG TTTATATCTG CTACTCAGTC TCAGCGTGCT TGGGATTGGC
TGGACACTCG ACAGCCTGTG GCAGAAGAAT GTTGATGACA ATAATGCCCT CGATGCGCCG
TTAGTGGCAT TGGCGCAATT ATTAGCTGAA TTACCTCCCG ATGCCCGCCA ACGGTATCTG
GAGGCGATCC CAGCGAACCC TGTGATGCCA CTGCAATTAC TCAATGCAGA TCAAGTCGCG
CTGGCAGATA ATCAAGCTTT AAGCACAAGC AAGGTGTTCA CCACCACGGC CAATGATGAT
AGCTTGCTGC AATTTATTCG AGTAGACGAT CAAGTCTTAA TGGCGGGGCC GCTGGACATA
GATCCCAGAG CTAACCTTCG CAGCCTGTTC ACCCTGTTCT TCTATTTGTC ACTTGCGTTA
GTAGCGTTGA TTTGGGTAGG CCCGCTTTCT CGGGATTTGA GCATACTGCG TAAAGCTACC
AAAGAGTTTG GCGAAGCCAA ATGGAACACG CGGATTACCC TGTCAAATCG CTCTCAGGTC
AAACCCTTAG CCAATACCTT TAACGAAATG GCGCGGCATA TCAGTGCCTT GATTGAGAAC
CAGAAACACC TGTCTAATGC GGTCTCCCAT GAGATCCGTA CGCCGCTGGC GAGGCTCAAA
TTCGCCCTTG CACTCATGCC CATGTATTGT CAGCCTGATT CGGACGAACA AAAGCGCCAA
GACTTTCTCG ATGAAATGCA GCTCGATATC AAAGAAATGG AAGACTTGCT TCAGGAACTG
CTAAACTACG CCAGCTTAGA GTCCCAGCGA GAAGGTATCC AGTTAGATGA GTACGATTTA
ATTAATCTCA TCAATCAAAG CATTAAGCGT CTAGAAAGCT TGAGCCCAAC ACCTATTACC
CTTAAAACAG AAGTCGAAAA ACTGCCCTTG TTTGGGGAAC CCGCATTAAT TGAACGTGCG
CTGCAGAATT TACTGACCAA TGCCCAACGC TTTGCCCGTA CTGAAATCGT TATTGAAGTT
AAGCAGACCC AGCATAGGGT CAATTTAAGT GTGAGTAACG ACGGCGAACC TATACCAGCA
GTAGATTTAC CTAAAGTGTT CGAGCCTTTT TATCGCAGCC AATCGGTGCA AAATGGCAAT
AAGGGACACG GTTTGGGACT GGCGATCATT AAACGGATTA TGCAGCGGCA TCAAGGGAAT
GTGAGCGTCA CCAGCGATGC GCAACATACC CGATTTAATT TAATTTGGCC GAAGAAGCGC
AAGCTGTAA
|
|---|
| Protein sequence | MKRLFISLYL LLSLSVLGIG WTLDSLWQKN VDDNNALDAP LVALAQLLAE LPPDARQRYL
EAIPANPVMP LQLLNADQVA LADNQALSTS KVFTTTANDD SLLQFIRVDD QVLMAGPLDI
DPRANLRSLF TLFFYLSLAL VALIWVGPLS RDLSILRKAT KEFGEAKWNT RITLSNRSQV
KPLANTFNEM ARHISALIEN QKHLSNAVSH EIRTPLARLK FALALMPMYC QPDSDEQKRQ
DFLDEMQLDI KEMEDLLQEL LNYASLESQR EGIQLDEYDL INLINQSIKR LESLSPTPIT
LKTEVEKLPL FGEPALIERA LQNLLTNAQR FARTEIVIEV KQTQHRVNLS VSNDGEPIPA
VDLPKVFEPF YRSQSVQNGN KGHGLGLAII KRIMQRHQGN VSVTSDAQHT RFNLIWPKKR
KL
|
|---|
| |