Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1030 |
Symbol | |
ID | 5371927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 1227652 |
End bp | 1229193 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640829223 |
Product | peptidase S10 serine carboxypeptidase |
Protein accession | YP_001365245 |
Protein GI | 152999564 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2939] Carboxypeptidase C (cathepsin A) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.531479 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACACCTT TACTATCGCG TCGACGCTCG TCGGCTAGGC CGCTTTGGTC ATTATTCGTG TTGCCGTTGA TCGTATTCTG CTCGAGCCTG AGCTATGCCG AACCCGCCAA AAAGGCCGAA GATAAAGCCG ACAAGCTTGT CCCTGAGGTG GTTAAAACCG AGCATAAGAT GACGATTCAA GGGCAAAAAG TCAGTTATCA AGCGATCAGT GGCGAGACTA TTTTAAAGGA TGATAAAGAC GAACCGCTGG CGAGTATTTT CTCTATTACC TATTTACGTG ACGATGTTAA AGACAGCAAC AAACGCCCCG TAACCTTTAT TTTTAACGGC GGTCCGGGCT CGGCCTCGCT CTGGTTGCAC ATGGGCTTAT TCGGTCCTAA ACGTGTGGTG GTGCCGGATG CAAAGGACGA TGGCGCAGCA CCTTATCATA TTGAATCAAA CGATTACTCT ATGCTTGATG AGTCCGATCT CGTGTTCATC GATCCCGTAG GTACTGGCTT TAGCCGCGCC TTAGGCGATA AAAAAGGTGC GGATTTTTGG GGCGTGAAAG AAGATGCCCA GTCGATTGCC GAGTTTATTC GCCGCTGGTT GATTGAGCAT AAACGTTGGA ACTCCCCTAA ATATTTGGCC GGCGAGAGTT ACGGTACTAC CCGCGCGGCA GCACTTGTGA ATGAATTGCA GGGTGGTTGG ACCGACATTT CGGTCAATGG AATTATGCTG ATTTCATCCA TTCTCGATTT TAGTCATGCC CGCTACCAGC CGGGTAATAA TCAACCATAC ATTGGTTTTT TACCGACGAT GGCGGCGACG GCTTTCTACC ACAATAAAGT CAGCGCTGCG GATAAAGCCT TGGGGCTAGA GGCTTTTATT GAGGAAGCGC GCCAGTTTGC CATTAAAGAT TATGCCCTCG CGTTGTTGCA AGGCAGCCGC TTAACACCTG AGGCATATCA AGCGGTACGT CAAAGCTTGG CGCGCTTTAC GGGGTTAAGT GAGCACTATT TAGATCGTGT TAATTTGCGC GTGAGCGCCA GTCGATACAC TAAGGAGCTG CTCAGAGATC AAGATTTGAC GATAGGGCGG TTAGACAGCC GCTACACAGG TAAAGACTAC GATAGTGGCG GCGATTCAAC CGACGATGAT CCATCAGGTT ATGGGATTGA TGGCGCTTAT ACGGCCGCCA TGCATCAATA TCTGTATGAC GATTTGGGCG TGACCTTATC ACGTCCTTTC AATGTACTTT CCGTTGATGT GAACCGGGGC TGGAACTGGA ATATCAGCGG TAAGCAGATG CGCTATGTCA ACGTCGCGCC TTATCTTGGC CAAGCGCAGC GTGAGAACAA AGATCTGAGG ATTTTTGTCG GCAACGGTTA CTTTGACTTT GCGACGCCAT TTTTTGCCAC CGAAAATACC TTTGCTGATA ACGGCATAGA TAATAGTCGT GTGAGTATGC ATTACTATAA AGCGGGGCAC ATGATGTACG TTGAGCCCGA ATCCTTAACT CAGTTAGTGA AGGATATCCG TGCTTTTTAT CAGCCTAAAT AG
|
Protein sequence | MTPLLSRRRS SARPLWSLFV LPLIVFCSSL SYAEPAKKAE DKADKLVPEV VKTEHKMTIQ GQKVSYQAIS GETILKDDKD EPLASIFSIT YLRDDVKDSN KRPVTFIFNG GPGSASLWLH MGLFGPKRVV VPDAKDDGAA PYHIESNDYS MLDESDLVFI DPVGTGFSRA LGDKKGADFW GVKEDAQSIA EFIRRWLIEH KRWNSPKYLA GESYGTTRAA ALVNELQGGW TDISVNGIML ISSILDFSHA RYQPGNNQPY IGFLPTMAAT AFYHNKVSAA DKALGLEAFI EEARQFAIKD YALALLQGSR LTPEAYQAVR QSLARFTGLS EHYLDRVNLR VSASRYTKEL LRDQDLTIGR LDSRYTGKDY DSGGDSTDDD PSGYGIDGAY TAAMHQYLYD DLGVTLSRPF NVLSVDVNRG WNWNISGKQM RYVNVAPYLG QAQRENKDLR IFVGNGYFDF ATPFFATENT FADNGIDNSR VSMHYYKAGH MMYVEPESLT QLVKDIRAFY QPK
|
| |