| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1027 |
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| Symbol | |
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| ID | 5372764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 1222315 |
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| End bp | 1223775 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640829220 |
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| Product | Fis family transcriptional regulator |
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| Protein accession | YP_001365242 |
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| Protein GI | 152999561 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAATA AGATTTCGGT CAATAATCAA AAATCAGTCG ATAAGCATTT CTTGCCTGAA
AATCAGTTAC TGCTTAACGC TGTCGGTGAA GGTATTTATG GATTTGATTT AAGCGGGAAT
GCGGTGTTCA TCAATCCCGC GGCTGAACGC ATGACAGGTT GGAAAAATGA AGAGTTACTG
GGCAAAAATA TCCATAACTG TCATCATCAC AGCCATGCCG ATGGTAGCCA TTATCCCCAA
GAAGATTGCC CAATTTACAA CACATTAAAG GATGGCATTA CCCGCGAAAT CACCCATGAT
GTGTTCTGGC GTAAAGATGG GAGTAGCTTT CCCGTGCATT ACAGTTCTAC GCCCGTTTAC
CGTGATAATG AACTCATTGG CGTAGTCGCG ATATTTCGTG ATATTAGTAT TCAAAAGCAA
ACAGAGCAGT CATTACGCCA AGCATTGGCG CAAGTGCAGG CGCTCTCGGA GCGACTCGCC
TCGGAGAATC ATTATCTGCA GGCTGAACTT GCTGACAAAA CGGGTGATGT GGATATTTCG
GGCGCCAGTA GCGTGATCCG CCACATGATC CAGCAATTGC ATATGGTGGC TAATACCGAC
AGTACTGTGC TCATTTGTGG TGAAAATGGC ACAGGGAAAG AGCTCGTTGC CCGTAACTTA
CATCAACTCA GTCGCCGCAA AGACAAGCCG ATGATCAGCG TCAACTGCGC CGCATTTTCG
GCATCCTTGT TAGAAAGTGA ACTCTTTGGA CACGAGAAAG GCGCATTCAC CGGTGCCACC
AGTCGCCGTA AAGGCCGCTT CGAACTTGCT CACCAAGGCA CACTATTCCT CGATGAAGTG
GCAGAACTCA GTTTAGAAGC CCAATCAAAA CTACTGCGGG TCATCCAAGA GCAATCCTTC
GAACGCCTCG GAGGCAGCGA AACCATTCAA GTGGATATTC GCTTGGTCGC CGCCAGTCAT
CACGACTTAC TCAAGCGGGT CGAGCAGGGA TTATTTCGGA TGGATCTCTA TTACCGCTTG
AATGTATTCC CTATTCAAGT ACCACCACTG CGCGCGAGGA TCGAAGATAT CCCCGAACTC
GTCAGCCATA TACTGCACAG CTTGAATCGT AAGTTAGGTA AAAAAATCCG CGGTGTGAGC
CAAAAAGGGC TGCAAAAGCT CATGGCTTAT ACATGGCCGG GCAATGTGCG CGAATTGCAA
AACATCCTCG AGCGCGAAGC CATTCTATCC CAAGGCGATA TTCTGCAGAT CCATGCGATG
CCGAGCAACA ACCCCTTAGC TCAAGCACAA GGCCAAACCT TAGCAGAAGC GGAAGCCTTA
CATATAGAAC AGACCCTTAA ACGCTTAAAC TGGCGAATAT CCGGTCCACT CGGCGCGGCG
AATGTGCTAG GCGTTCCGGC AAGTACGTTA AGATCGCGGA TGAAAAAACT GGGGATCCAA
CGTCAATCGA GTGAAATATA A
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| Protein sequence | MTNKISVNNQ KSVDKHFLPE NQLLLNAVGE GIYGFDLSGN AVFINPAAER MTGWKNEELL
GKNIHNCHHH SHADGSHYPQ EDCPIYNTLK DGITREITHD VFWRKDGSSF PVHYSSTPVY
RDNELIGVVA IFRDISIQKQ TEQSLRQALA QVQALSERLA SENHYLQAEL ADKTGDVDIS
GASSVIRHMI QQLHMVANTD STVLICGENG TGKELVARNL HQLSRRKDKP MISVNCAAFS
ASLLESELFG HEKGAFTGAT SRRKGRFELA HQGTLFLDEV AELSLEAQSK LLRVIQEQSF
ERLGGSETIQ VDIRLVAASH HDLLKRVEQG LFRMDLYYRL NVFPIQVPPL RARIEDIPEL
VSHILHSLNR KLGKKIRGVS QKGLQKLMAY TWPGNVRELQ NILEREAILS QGDILQIHAM
PSNNPLAQAQ GQTLAEAEAL HIEQTLKRLN WRISGPLGAA NVLGVPASTL RSRMKKLGIQ
RQSSEI
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