Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0989 |
Symbol | |
ID | 5373508 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 1182177 |
End bp | 1183634 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640829183 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001365205 |
Protein GI | 152999524 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT CACAATCCAA CTTCCCTCAT TTGCAACTCA AGGATGGCAT CCTCAAAGAC CAGCTTTACC ATGCCTTTAG AGAGGCGATT CTCGATGGAC GCTTGCATCC TAGAATGAAG CTGCCCTCCA GCAGAGCCTT ATCGGAAACC ATGCAGATTT CGCGAAACTC AGTACTGCAA GGGTTTGATC GCCTAATTGA TGAAGGCTAC CTGCTGACTA AGCCAGGTTC GGGCACCTAT GTGTCTGATA CGATTCCCGA CGAACTGATC GACATCCCAA ACCGCAGTGA TGTAAGCGTT CAACCCTTTG ATTCTGAATT GAAAATCAAT CCACAGTTAC TGGAGATTGC GCGACTTAGG GACAAAGGAA ATACCCGTCA CAGCATGTTC AACATTGGCG TGGGATGTGT TGATCTTTTC CCGCACCAAC TTTGGGGCCG CCTGTTAGGT AGAGTCTGGC GACAATCGCG CAAAACGCAG GGGAAACATA GCCATAGCGC TGGGCATTTA CCATTGCGCG AAGCGATCAG CGACTATGCC CGTTCAACCC GAGGGCTAAA TTGCACGCCC GAGCAAATCA TCATAGTCAA TGGCACTCAG CAAGCCATTA ATCTCACGGC ACAGGTACTG CTACAACAGC GAGATGAAGT CTGGCTCGAT GAACCCGGAT ACGACGGCGC CTTAGGCGCT TTTCTCTCGC AAAATCTGCA AGTCCGCCCA GTTAGCCTTG ATGATGAAGG TACAAAGATA GCCGAGGCGA TACAGCAATG GCCCTCGGTG AAACTGGCTT TTACCGCACC TTCACATCAG TTCCCCCTCG GCGGAACGCT TAGTCTGCCA CGGCGATTAG CCTTACTCGA TTGGGCCGCT GAGCAGAATA AGTGGATTTT AGAAGATGAC TATAATAGCG AGTTTCGTTA TAGCGCCCGC CCGATACAGG CATTGCAGGG ACTCGATAAA CAACAGCGGG TGATCTACGC AGGCACCTTT TCCAAGATGT TATTACCAGA GCTACGACTC GGCTTTCTCG TCGTTCCGCC TAAACTGGTG GACGCCTTTA ACCTTGCCAA ACATTACGCC GACTCGCATA CGGCTTACCT AGAACAAGCC ACATTGGCGC TGTTTATCGC AGAGGGACAT TACGCCCGGC ATGTACGGCG AGTTCGAAAA GCTTGTTTAG CGCGCCAAAC GGCGTTAATC ACTGCAATTG AGCAGTATCT GTCAAACAAA TTGTCAGTTC AGACCTCAGA TTCAGGGATT CACCTCGTGT GTTGGCTAAA AGGCGACTTG ACCGAAGACG AAGTGATCAA CAAATGCCGC CAACTCAGTT TAGGGGCGCA GCCTTTGTCT CGGTATTGCC AAGCGCCCTA TCCAAGGCAA GCTATTTTAC TGGGTTACGC AGCCCATACG CCCGATGAGC TGCGGGAAAA TATTAAAAAA CTCGCCCAAG TCCTTTAA
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Protein sequence | MKKSQSNFPH LQLKDGILKD QLYHAFREAI LDGRLHPRMK LPSSRALSET MQISRNSVLQ GFDRLIDEGY LLTKPGSGTY VSDTIPDELI DIPNRSDVSV QPFDSELKIN PQLLEIARLR DKGNTRHSMF NIGVGCVDLF PHQLWGRLLG RVWRQSRKTQ GKHSHSAGHL PLREAISDYA RSTRGLNCTP EQIIIVNGTQ QAINLTAQVL LQQRDEVWLD EPGYDGALGA FLSQNLQVRP VSLDDEGTKI AEAIQQWPSV KLAFTAPSHQ FPLGGTLSLP RRLALLDWAA EQNKWILEDD YNSEFRYSAR PIQALQGLDK QQRVIYAGTF SKMLLPELRL GFLVVPPKLV DAFNLAKHYA DSHTAYLEQA TLALFIAEGH YARHVRRVRK ACLARQTALI TAIEQYLSNK LSVQTSDSGI HLVCWLKGDL TEDEVINKCR QLSLGAQPLS RYCQAPYPRQ AILLGYAAHT PDELRENIKK LAQVL
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