| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0973 |
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| Symbol | metH |
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| ID | 5370779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 1162543 |
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| End bp | 1166277 |
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| Gene Length | 3735 bp |
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| Protein Length | 1244 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640829167 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_001365189 |
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| Protein GI | 152999508 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATAC CCTCTACCAA AGCCGGCCAG ATATTGGCAG ACATTCGTAA ACAGCTTGCT
GAGCGCATTC TAATCTTAGA CGGTGCCATG GGCACTATGA TCCAAGACCA CAAGCTCGAA
GAAGAGGATT ATCGCGGCGA ACGCTTTAAA GATTGGCACA CTGACGTCAA AGGCAACAAC
GATTTATTGG TGTTGTCGCA ACCCCACATC ATCAAACAGA TTCACACCGA CTACTTAAAC
GCCGGTGCCG ACATCATTGA AACCAACACC TTTAATGCTA CTACTATTGC CATGGCCGAC
TACGACATGC AGTCGCTGTC CGCCGAAATT AACTTAACAG GCGCTCGCCT CGCCCGTGAA
GCCTGTGATG AAGTGTTTGC TGCCACAGGC ATTCCGCGCT ACGTCGCCGG TGTGTTAGGC
CCCACTAACC GTACGTGTTC GATTAGCCCT GATGTGAACG ACCCAGGCTA CCGCAACGTC
AGCTTCGATG AGTTAGTGAG CGCTTACCGA GAATCCACTA AGGCGCTGAT TGAAGGCGGC
GCGGATATCA TTATGGTCGA GACCATATTC GATACCTTGA ACGCCAAGGC TGCACTATTT
GCGATTGAAT CGGTGTTTGA TGACTTATTT GGTCAGCATT CTAAAGACAG ATTGCCAATC
ATGATTTCGG GCACCATTAC CGATGCATCA GGCCGTACCC TTACGGGTCA AACCACCGAA
GCCTTTTATA ATTCCCTGCG CCATATCAAG CCGTTATCTA TCGGCCTTAA CTGTGCGCTC
GGGCCAAAAG AACTGCGCCC GTACGTCGAA GAATTATCGC GTATCGCCGA ATGTTATGTG
TCGGCGCATC CGAACGCGGG TCTGCCGAAC GAGTTTGGCG GCTATGATGA AACCCCAGAG
GACATGGCGA ACGTAATTGA AGATTGGGCG CGCGAAGGCA TGCTCAATAT TATCGGCGGT
TGCTGTGGTA GTACGCCTGA ACATATCCGC GTTATTCGCG AAGCGGTCGA TAGACATAAC
CCGCGCGTTT TACCCGATAT CCCCGTCGCC TGCCGCTTAG CCGGTTTGGA ACCGCTGACT
ATCGATGCCC AATCCCTGTT CGTTAACGTG GGTGAACGCA CCAACGTTAC AGGTTCGGCC
AAGTTTTTAA AGCTGATCAA AGAAGGCAAG TTTGAGCAAG CGCTCGATGT CGCCCGCGAG
CAGGTCGAAA GCGGCGCGCA GATCATCGAC ATCAACATGG ACGAAGGCAT GCTCGATGGC
GCCGAGATCA TGCACAAGTT TTTAAACTTG ATCGCCTCTG AGCCCGACAT CAGCCGCGTG
CCGATTATGA TCGACTCCTC TAAGTGGGAA GTGATCGAAG CTGGCCTCAA ATGTATTCAA
GGCAAGGGCA TAGTTAACTC TATTTCCCTT AAAGAAGGCG AAGCCAAGTT TATCGAGCAA
GCCACCTTAG TGAAACGCTA CGGCGCGGCG GCCATTATCA TGGCATTCGA CGAACAAGGT
CAGGCCGACA CTAAGGCGCG TAAAATCGAA ATCTGTACCC GCGCTTATCG GGTGCTGGTT
GATAAGGTCG GCTTTCCGCC AGAAGACATC ATCTTCGACC CGAACATTTT CGCCATCGCC
ACCGGTATCG ATGAACACGA CAACTATGCC GTCGATTTTA TTGATGCCAT TAAAGCGATT
AAAGCCACCC TGCCCCACGC AATGATTTCG GGCGGCGTGT CGAATGTGTC GTTCTCGTTT
CGCGGTAACA ACCCAGTGCG CGAGGCGATT CACGCGGTAT TCCTGTACCA CGCCATCAAA
GTCGGCATGG ACATGGGCAT TGTCAACGCG GGTCAGTTAG CCATTTACGA CGATATCGAT
CCTGAGCTTA AAGTACGGGT CGAAAACGTA GTACTTAACT TGCCCTGCCC AGTCGAAGGC
TCAAGCAATA CCGAGCAGTT ACTTGAAATC GCGGAGAAAT TCCGCGGTGA TGGCGCACAG
GTGGGTAAAA AAGAAGATTT AGAATGGCGC AGCTGGCCGG TAAGCCAACG CTTATCCCAT
GCGCTCGTCA AAGGCATTAC CGAATTTATT GATGAAGATA CCGAAGCCGC TCGCCAAGAA
GCGAAACGTC CACTGGATGT GATTGAAGGC GCCTTGATGG ACGGCATGAA CGTGGTCGGC
GACTTGTTCG GCTCGGGCAA GATGTTCCTG CCGCAGGTAG TGAAATCGGC GCGGGTGATG
AAAAAAGCCG TGGCTTACTT AAACCCCTAC ATTGAGCTTG AAAAGGTCGA AGGCCAATCT
AATGGCAAGA TTTTGATGGT GACAGTAAAA GGTGACGTGC ACGATATCGG CAAAAATATC
GTCGGCGTGG TGCTCGCCTG TAACGGTTTT GAGGTATTCG ATTTAGGCGT GATGGTGTCG
GTGGAGCGAA TTCTCGACGC AGTGAAAGAA CACAATATCG ATATCATCGG CATGTCGGGG
CTCATCACGC CGAGTCTGGA CGAGATGGTG CATAACGTGA AAACCTTCCA CCGCGAAGGC
TTAACCATTC CGGCGATTAT CGGCGGTGCA ACTTGCTCGA AAATCCACAC AGCGGTGAAA
ATTGCGCCCC ATTATCCCCG TGGCGCTATC TATATTGCCG ATGCGTCCCG CGCCGTGCCA
ATGGTGAGTA AGCTCATCAA CAACGAGACT CGCCAAGCGA CCATAGACGA AACCTATGCC
GAATACGACG ACATGCGCAC TAAGCGTTTA TCCCAAGCCA AGCGCAAAGA AATAGTGTCA
CTCGAAGCAG CGCGCGATAA CCGCTGCCAA CACGATTGGG CCAACTACAC CCCGTTCACG
CCAAACGTGC TCGGGCGCCA AGTGTTTGAT AATTATCCAT TAGAAGACTT AGTGGAACGT
ATTGACTGGA CACCGTTTTT CCGCTCGTGG GAACTGCACG GCCATTACCC TGAAATCCTC
ACCGATAAAG TGGTCGGTGA AGAAGCGCAA AAGCTGTTCG CCGATGGTCA GGCCATGCTC
AAGCAAATCA TCGAAGAAAA GTGGCTCACG GCGAAAGCGG TTATCGGCTT ATTCCCAGCC
AATACCGTCA ATTACGACGA CATTGAGCTG TATACCGATG AGTCGCGCAC CACAGTTGAA
ATGACCACGC ATCACCTGCG GATGCAGCTT GAACGTGTCG GTAACGACAA CTTCTGCCTA
TCCGACTTTG TTGCACCAAA AGACTCTGGC GTCGCCGATT ACATGGGCGG CTTTGCGGTG
ACCGCAGGCC ACGGTATCGA CGAACATGTG GCGCGTTTTG AAGCGAACCA CGACGACTAC
AACGCCATCA TGCTCAAATG CTTAGCTGAC CGTTTGGCCG AAGCCTTTGC CGAGCGGATG
CACGAACGAG TGCGTAAAGA ATTTTGGGGT TATGCGGCCG ACGAGCAGTT AAGCAACGAA
GCCTTAATCC GCGAGAAATA CAAAGGTATA CGCCCCGCAC CGGGTTACCC AGCTTGCCCA
GATCACACAG AAAAAGGCTT GTTATGGGAC TTGCTCAAGC CCGATGAAAC CATCGACTTG
AATATCACCG AAAGCTACGC TATGTTCCCC ACAGCGGCAG TATCCGGCTG GTATTTCGCC
CACCCGAAAT CGCGCTACTT TGGTGTGAGT AACATCGGCC GCGATCAAGT GGAAGATTAT
GCCAAGCGTA AAGGGATGAC TGTCGCAGAA ACGGAGAAGT GGCTGGCGCC AGTGTTGGAT
TATGATCCTG AGTAA
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| Protein sequence | MTIPSTKAGQ ILADIRKQLA ERILILDGAM GTMIQDHKLE EEDYRGERFK DWHTDVKGNN
DLLVLSQPHI IKQIHTDYLN AGADIIETNT FNATTIAMAD YDMQSLSAEI NLTGARLARE
ACDEVFAATG IPRYVAGVLG PTNRTCSISP DVNDPGYRNV SFDELVSAYR ESTKALIEGG
ADIIMVETIF DTLNAKAALF AIESVFDDLF GQHSKDRLPI MISGTITDAS GRTLTGQTTE
AFYNSLRHIK PLSIGLNCAL GPKELRPYVE ELSRIAECYV SAHPNAGLPN EFGGYDETPE
DMANVIEDWA REGMLNIIGG CCGSTPEHIR VIREAVDRHN PRVLPDIPVA CRLAGLEPLT
IDAQSLFVNV GERTNVTGSA KFLKLIKEGK FEQALDVARE QVESGAQIID INMDEGMLDG
AEIMHKFLNL IASEPDISRV PIMIDSSKWE VIEAGLKCIQ GKGIVNSISL KEGEAKFIEQ
ATLVKRYGAA AIIMAFDEQG QADTKARKIE ICTRAYRVLV DKVGFPPEDI IFDPNIFAIA
TGIDEHDNYA VDFIDAIKAI KATLPHAMIS GGVSNVSFSF RGNNPVREAI HAVFLYHAIK
VGMDMGIVNA GQLAIYDDID PELKVRVENV VLNLPCPVEG SSNTEQLLEI AEKFRGDGAQ
VGKKEDLEWR SWPVSQRLSH ALVKGITEFI DEDTEAARQE AKRPLDVIEG ALMDGMNVVG
DLFGSGKMFL PQVVKSARVM KKAVAYLNPY IELEKVEGQS NGKILMVTVK GDVHDIGKNI
VGVVLACNGF EVFDLGVMVS VERILDAVKE HNIDIIGMSG LITPSLDEMV HNVKTFHREG
LTIPAIIGGA TCSKIHTAVK IAPHYPRGAI YIADASRAVP MVSKLINNET RQATIDETYA
EYDDMRTKRL SQAKRKEIVS LEAARDNRCQ HDWANYTPFT PNVLGRQVFD NYPLEDLVER
IDWTPFFRSW ELHGHYPEIL TDKVVGEEAQ KLFADGQAML KQIIEEKWLT AKAVIGLFPA
NTVNYDDIEL YTDESRTTVE MTTHHLRMQL ERVGNDNFCL SDFVAPKDSG VADYMGGFAV
TAGHGIDEHV ARFEANHDDY NAIMLKCLAD RLAEAFAERM HERVRKEFWG YAADEQLSNE
ALIREKYKGI RPAPGYPACP DHTEKGLLWD LLKPDETIDL NITESYAMFP TAAVSGWYFA
HPKSRYFGVS NIGRDQVEDY AKRKGMTVAE TEKWLAPVLD YDPE
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