| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0850 |
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| Symbol | |
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| ID | 5372280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 1007935 |
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| End bp | 1008639 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640829045 |
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| Product | sugar fermentation stimulation protein A |
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| Protein accession | YP_001365067 |
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| Protein GI | 152999386 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1489] DNA-binding protein, stimulates sugar fermentation |
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| TIGRFAM ID | [TIGR00230] sugar fermentation stimulation protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000103946 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTTA CTCCGCCACT ACAACAGGGC ATTTTACTGC GCCGCTATAA ACGTTTTCTG
GCCGATGTGC AGTTAAGCGA CGGCAGTGAG ATCACTCTGC ATTGCCCCAA TACGGGTTCT
ATGCGTAATT GCCTGTATCC CGGTGAAACC GTATGGTTTT CTACCTCTGA TAACCCTAAA
CGTAAGTATG CCCATACATG GGAACTGATG ACCACGCCAG ATGCTGGCCT AATCGGAATC
CACTCGGGTC AAGCGAACAC CTTAGCCGAA GAAGCCATCA ATAAGGGTAT CATCAAGGAG
CTCACGGGTT ATGACAGCCT AAGCCGTGAA GTTAAATATG GTGATGAAAA TAGCCGCATT
GATATCCTGC TACAGGGTGC TCAAAAACCC GCCTGTTATA TAGAAGTCAA AAGTTGTACT
TTGCTCGAGG ATGGCCAAGG TTATTTTCCT GATGCGGTGA GCCTACGAGG TCAAAAACAT
TTACGTGAAT TGATGCACAT GGTCAGTCAA GGCCACAGAG CCGTATTGCT GTTTGTGGTG
CAGCACAGTG ACATATTCAG TGTTGCACCC GCAGCACATA TCGATCCTGA ATATGCTAAG
TTACTGAAAA AAGCAGTGTT AGCCGGAGTA GAAGTCCTTG CCTATCGCTG CGAAATGTCC
CCGACTGAGA TTCACCTAGC CCAAGCCTGT GTTGTCCGAG TATGA
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| Protein sequence | MEFTPPLQQG ILLRRYKRFL ADVQLSDGSE ITLHCPNTGS MRNCLYPGET VWFSTSDNPK
RKYAHTWELM TTPDAGLIGI HSGQANTLAE EAINKGIIKE LTGYDSLSRE VKYGDENSRI
DILLQGAQKP ACYIEVKSCT LLEDGQGYFP DAVSLRGQKH LRELMHMVSQ GHRAVLLFVV
QHSDIFSVAP AAHIDPEYAK LLKKAVLAGV EVLAYRCEMS PTEIHLAQAC VVRV
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