Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0721 |
Symbol | |
ID | 5372220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 865025 |
End bp | 865783 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640828915 |
Product | putative hydroxylase |
Protein accession | YP_001364941 |
Protein GI | 152999260 |
COG category | [S] Function unknown |
COG ID | [COG3128] Uncharacterized iron-regulated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000319663 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTACGGC AGCCCTCGGG CTGCCTTTTA TGTTTTATAA ACGGTATACG TCATGCCGTG TTTTTTGCCC TATGGAACCC AGAGATGCTG ATTGAAATTC CTAATGTTTT CTCAAAACAA GAAGTGAGTC ACTTACGCGA ACAGTTAGAT GCTCGCCGCT GGATAGACGG TAATCAAACC TCCGGCGCGA TGGCGACAAC TCGTAAGCGC AATCAGCAAC TAGATAAGGA CGACCCAGTT GCTGTCGCGC TAGGTCAGCA GATTATGGAC AGGCTGTTAG CACACCCACA ATTTGTATCT GCCGCATTAC CATTACAGTT TTATCCGCCT TTGTTTAATC GATATCAAGG CGGTGAAACC TTTGGGTATC ACATAGATAA TGCTATCCGC TCGACCCCTG ATGGGATGAT CCGTACCGAT CTGTCAGCGA CTTTATTTCT CAGCGAACCA GAAAGCTATC AGGGCGGCGA ATTAGTTATC CAAGATACCT ACGGCCAACA AAGCATAAAA TTATCAGCGG GTTCATTAGT GCTGTATCCA TCGAGCAGCT TGCATCAGGT CACGCCAGTC CTGTCGGGCG AGCGTACCGC CGCCTTTATG TGGCTGCAAA GTATGGTTCG TGATGAAGGT CAGCGCCGCT TACTATTTCA ACTTGATCAA TCGATTCAAA CACTCACAGC TCAGCAGGCT GCAGAACAAG AGTTGTTTAA TCTGACGGGG ATTTACCATA ACTTGCTCAG GCGTTGGAGC GAGCTATAG
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Protein sequence | MLRQPSGCLL CFINGIRHAV FFALWNPEML IEIPNVFSKQ EVSHLREQLD ARRWIDGNQT SGAMATTRKR NQQLDKDDPV AVALGQQIMD RLLAHPQFVS AALPLQFYPP LFNRYQGGET FGYHIDNAIR STPDGMIRTD LSATLFLSEP ESYQGGELVI QDTYGQQSIK LSAGSLVLYP SSSLHQVTPV LSGERTAAFM WLQSMVRDEG QRRLLFQLDQ SIQTLTAQQA AEQELFNLTG IYHNLLRRWS EL
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