Gene Shew185_0702 details

Gene Information

• Locus tag: Shew185_0702
• Symbol: rplM
• ID: 5373600
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: +
• Start bp: 844425
• End bp: 844853
• Gene Length: 429 bp
• Protein Length: 142 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640828896
• Product: 50S ribosomal protein L13
• Protein accession: YP_001364922
• Protein GI: 152999241
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0102] Ribosomal protein L13
• TIGRFAM ID: [TIGR01066] ribosomal protein L13, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00000000111952
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGACTT TTACTGCTAC ACCAGAAACC GTAACTCGTG ACTGGTTCGT CGTTGATGCA 
GACGGCAAAA CTTTAGGTCG TATCGCTACT GAAATCGCTA TCCGTTTACG CGGTAAGCAT 
AAGCCAGAAT ACACTCCACA CGTTGATACC GGTGATTACA TCATCGTTGT TAATGCTGAA 
AAAGTGACTG TTACTGGTAA CAAAGCGAAA GGCAAAACGT ACTACTCGCA TTCAGGCTTC 
CCTGGTGGCA TTAAGCAAAT CAGCTTTGAA AAGCTGCAAG CGCAAAAGCC AGAAATGATC 
ATCGAGAAAG CAGTTAAGGG TATGTTACCA AAAGGTCCTC TGGGCCGTGC CATGTTCCGT 
AAACTGAAAG TTTACGCTGG CGCAGAACAT AACCACACTG CACAACAACC TCAAGTTCTT 
GATATCTAA 

 

Protein sequence

MKTFTATPET VTRDWFVVDA DGKTLGRIAT EIAIRLRGKH KPEYTPHVDT GDYIIVVNAE 
KVTVTGNKAK GKTYYSHSGF PGGIKQISFE KLQAQKPEMI IEKAVKGMLP KGPLGRAMFR 
KLKVYAGAEH NHTAQQPQVL DI