Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0687 |
Symbol | |
ID | 5371704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 831307 |
End bp | 832038 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640828881 |
Product | ABC transporter related |
Protein accession | YP_001364907 |
Protein GI | 152999226 |
COG category | [R] General function prediction only |
COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000839172 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCAAA TCACCCTAAG AGCACAAAAT CTGGCGAAGA GTTACAAGAG TCGCCAAGTG GTTAAAGACG TCAGTCTGAC GGTCAAAACC GGTCAAGTCG TTGGCCTACT CGGCCCGAAC GGCGCGGGTA AAACCACCAC TTTTTACATG GTCGTTGGTC TGGTTAAAAG CGATAAAGGC CACATCTTTA TCGACGATGA TGATTTAACC GCAGATCCTA TGCACCTGCG CGCCCGCAAA GGCATAGGTT ACTTGCCACA GGAAGCCAGT ATCTTCCGTA AACTGACCGT CCATGACAAC ATCATGGCCG TGCTTCAAAC GCGTAAAGAA TTAAAAAAAG AGCAAAGGGA AGAAGAGCTA GAACATCTGC TTGAAGAGTT CCACATCACC CACATCCGTG ACAGCCAAGG CATGTCATTG TCGGGCGGTG AACGTCGCCG TGTCGAAATT GCGCGTGCGT TAGCAGCAAA TCCTAAGTTC ATTTTGCTCG ATGAACCCTT TGCGGGTGTC GATCCTATTT CAGTTATCGA TATTAAAAAG ATTATCGAAC AGCTCAAAAG TCGTGGCCTT GGCGTGTTGA TCACAGACCA CAATGTCCGT GAGACATTAG ATGTGTGTGA ACATGCCTAT ATCGTGAGTC ACGGAAACTT GATTGCCGAA GGAACACCCG CAGAGATCTT AGACAATCAG CAAGTTAGGG CTGTGTACTT AGGTGAACAA TTCAGGCTAT AG
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Protein sequence | MTQITLRAQN LAKSYKSRQV VKDVSLTVKT GQVVGLLGPN GAGKTTTFYM VVGLVKSDKG HIFIDDDDLT ADPMHLRARK GIGYLPQEAS IFRKLTVHDN IMAVLQTRKE LKKEQREEEL EHLLEEFHIT HIRDSQGMSL SGGERRRVEI ARALAANPKF ILLDEPFAGV DPISVIDIKK IIEQLKSRGL GVLITDHNVR ETLDVCEHAY IVSHGNLIAE GTPAEILDNQ QVRAVYLGEQ FRL
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