Gene Shew185_0684 details

Gene Information

• Locus tag: Shew185_0684
• ID: 5369819
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: -
• Start bp: 828959
• End bp: 829402
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640828878
• Product: PTS IIA-like nitrogen-regulatory protein PtsN
• Protein accession: YP_001364904
• Protein GI: 152999223
• COG category: [G] Carbohydrate transport and metabolism; [T] Signal transduction mechanisms
• COG ID: [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)
• TIGRFAM ID: [TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.00828726
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACTTT GTACCATACT GCGGCCGGAG TGCACTACCT GCGCCACTCC GGGCAGCAAG 
AAAAAGGTAC TGGAACTCAT CAGCGACTTA GTCGCTGCCC AGTACCCGAC CCTCTCATCT 
CAAGAGATAT TCGAAAGCCT AGTGGCGCGC GAAAAGATGG GGAGCACAGG TATAGGTAAC 
GGCATCGCCA TTCCACATGG TCGACTAGCC GATATAGATC AGCCCATTGC CATACTCATT 
AAGTGTGAAG AGCCGATAGC ATTCGATGCT ATCGATAAGC AACCTGTTGA TATTTTATTT 
GCACTACTGG TGCCTGCAGA CCAATGTCAG CAGCACTTAA GTACCTTGTC TTGCATGGCC 
GAAAAGCTGA GCGACAAGCA AATATTAAAG CAATTACGCA AGACGCATGA TGAAACGGAA 
CTCTATCAGG TAATCACTGG ATGA 

 

Protein sequence

MELCTILRPE CTTCATPGSK KKVLELISDL VAAQYPTLSS QEIFESLVAR EKMGSTGIGN 
GIAIPHGRLA DIDQPIAILI KCEEPIAFDA IDKQPVDILF ALLVPADQCQ QHLSTLSCMA 
EKLSDKQILK QLRKTHDETE LYQVITG