| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0662 |
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| Symbol | |
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| ID | 5370299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 802819 |
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| End bp | 804813 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640828857 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_001364883 |
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| Protein GI | 152999202 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGACTC AGTTCGCGCG CACATTAGCT ATTTTACGGC AACGAACTCG CTCAACGGTT
GCTAAGGTTC TGTTGATCAT CAGCATGTTT ATCGGGATTT GTATCGCCCT CGTCGGCCTA
GTGTATATTC AAGGCAATAT ATTTGATGGT GTACGCACCT ATGTCCGCGG TGAAGGCTTG
TGGGCCAAGG CGCAAAAAGA TGCGGTACTT TATCTCACCC ATTACTCTTA TACCCAAAAT
GATGTGGACT TTCAGCGTTA TCGTGCAGCG ACGAGCGTTA TGGAAGGTGA TCATCAAGCT
AGGCAAGCCC TGCTCGCAAC GCCAATCGAT GAACAGGCCG CCAAACTGGG TTTTATTCAG
GGCCTCAATG ACGAACGGGA TACCGACTCA CTGATCTGGT TCTTCCGTCA CTTTCAATCC
AATTCCTATA TGCGGCAAGC GATTCAGCTG TGGGGCTTAG CGGATCAACG CTTCGAGTTT
GTAATGCAAC TCGCCGAGAA TATGCGTATT GAAATCAATC AACTGGGTGG CAGGCCCGAA
ATCCTCGCGC AATACCGCCA GCAATTGATT GATGTAAATG AAGAATTACT CAGCCTAGAA
ATTGAATTTT CAGCTGTGCT CAGTGAAGGT GCACGATGGG TCAAGCAAAT GACCTGGTTG
ATTAGCCTTG GCGCCCTACT GCTGTTTATT AGTATTGGGA TCTTCGCCAG TCGGCAGATC
ATTCGTAACA TCGCCAAATC TGAACGGCAG TTACTGATCA GTGAATCTCG CTTCACTAGC
CTGAAAAACT CCGACACCAT AGGGATTATT TCATGGCAGC TTGATGGCAC CCTCCATGAT
GCTAATGATC ATTTCCTCAA GATGCTCAAT TTTGACCGCG CGGATTTAAC CTCAGGCTTA
ATCAACTGGC GCTCAATTAC CCCACCAGAA TATGAAACAC GAGATGCCAT TGCGATTGCA
GAGTTAGAAC AGTTTGGTCA CTGCCAACAA TATGAAAAAC AACTTATCAG CAAGAGTGGT
GCCTTAGTGC CTGTGATGTT AGCGGCCAGT TTTTTAAATG GCAGCAAATG TGAAGGCGTG
GCTTACTTTA TGGATCTCAC CGCCAGTAAA CAGGCCGAAG ATAAACTCAG GCTCGCGGCA
ACCGTGTTTA ATGCCAGCAC CGACGGCATA ATGATCACCG ATCCCCTGCT GAGTATAATT
TCTATCAATC AAGCCTTTAC TCATATAACT GGCTTTACCC AGCAGGATTT GCACGGCGAT
GCCAACCACT TCCTCAATGA CGGGCACAAT AGTGATGACG CCCGCCAAGC CATGCTAAAT
CTGCTACAAC AGGGCGAACA ATGGCAGGGG GAATTACTCA AACAAGTTAA ATCGGGCGAC
TTACTGCCAC TCAGTGTGCG CATCAATACA GTGCGCAATG AGCATGACCG CCTGACTCAT
TTTGTCATTG TGATTACCGA CATTGCCGAA CGCAAGGCAG AGGAGGAATA TCTGCGTCAT
ATCGCCCATC ACGATGCCCT GACTAACCTG CCTAATCGTG TGTTATTCCA CACTAAACTT
GAACAAGCCA TAGTGCACGC CCAACGGTCT GATGATATTT TTGCAATCCT TTTCTTAGAC
TTAGATAACT TTAAGCCAGT GAATGACCAG TTTGGTCACG ATGTGGGAGA TAAACTATTA
CAGGAAGTCG CGAAACGGCT TTCATCTGGG ATTCGCCAAA TGGATACCAT CACTCGCCTC
GGAGGCGATG AGTTTGTGAT CCTGCTAGAA CACCTTGCCA ATACCCACAG AATCGGCCAA
CTGATCCCTC AGATAAGCCA AGCTATTTGC GCGCCTTACA CTATCAATGG TCATCAAATC
CATATCGGTG TCAGCGTCGG TTTGGCGATT TATCCAGAAA ACGGCACAGA TGCAAAAAGC
CTGATCAATC ATGCTGATCA GGCCATGTAT TCGATGAAAA AAACCAATAA GACTCACCTG
CAAAGCCTAG GTTAA
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| Protein sequence | MGTQFARTLA ILRQRTRSTV AKVLLIISMF IGICIALVGL VYIQGNIFDG VRTYVRGEGL
WAKAQKDAVL YLTHYSYTQN DVDFQRYRAA TSVMEGDHQA RQALLATPID EQAAKLGFIQ
GLNDERDTDS LIWFFRHFQS NSYMRQAIQL WGLADQRFEF VMQLAENMRI EINQLGGRPE
ILAQYRQQLI DVNEELLSLE IEFSAVLSEG ARWVKQMTWL ISLGALLLFI SIGIFASRQI
IRNIAKSERQ LLISESRFTS LKNSDTIGII SWQLDGTLHD ANDHFLKMLN FDRADLTSGL
INWRSITPPE YETRDAIAIA ELEQFGHCQQ YEKQLISKSG ALVPVMLAAS FLNGSKCEGV
AYFMDLTASK QAEDKLRLAA TVFNASTDGI MITDPLLSII SINQAFTHIT GFTQQDLHGD
ANHFLNDGHN SDDARQAMLN LLQQGEQWQG ELLKQVKSGD LLPLSVRINT VRNEHDRLTH
FVIVITDIAE RKAEEEYLRH IAHHDALTNL PNRVLFHTKL EQAIVHAQRS DDIFAILFLD
LDNFKPVNDQ FGHDVGDKLL QEVAKRLSSG IRQMDTITRL GGDEFVILLE HLANTHRIGQ
LIPQISQAIC APYTINGHQI HIGVSVGLAI YPENGTDAKS LINHADQAMY SMKKTNKTHL
QSLG
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