Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0643 |
Symbol | |
ID | 5372030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 782484 |
End bp | 783851 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640828841 |
Product | MATE efflux family protein |
Protein accession | YP_001364867 |
Protein GI | 152999186 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGACA GACACGGGCT GCTCACCGCG CCAATTGGTC GTGTACTGCT CAACATGAGC CTCCCCAACT TAATTGGCAT TATGACCATT CTAGGTTTCA GCCTCGCTGA CACTTTTTTT ATCAGCCAAT TGGGCACCGA AGCCTTAGCC GCCATCAGTT TTACCTTTCC GGTGACCTTA GTGATCTCGA GCATCGCCAT TGGTATTGGT GCTGGAGTCT CGACCAATTT AGGTCGGCTT ATCGGCTCGG GTAATGCCCA CAAGGCCAAA GTATTCTTGC ATGATGCCTT ATTGCTGACC TTTGGTTTGA TTGCCAGTTT AGCCGCTCTG GGTAGCATTT TTATCGAGCC ACTGTTTCGC TTACTCGGAG CAAACGATGA CAGCTTGCCG CTAATCCACG ACTATATGAT TTACTGGTAT GTCGGTGCAC CGCTGCTGGT GTTGTTGATG GTGGGCAATC AGGGTTTACG TTCCACTGGC GATACCCGCT CGCCGGCGAT GATTATGGCG CTGGCGGCAG TCATTAACCT TATCCTCGAT CCTTTATTGA TTTTTGGTAT TGGGCCGTTT CCGCGCTTAG AAATCCAAGG CGCCGCAATT GCGACTCTGT TCGCTTGGTT AGTGGCCTTA TCTTTGTCGG GATATTTGTT GATTGTCAGG CGCAAAATGC TCGAATGGAC AGTGTTTGAC ATCGACAGAA TGCGCGCCAA CTGGACTAAA CTTGCCCATA TCGCCCAACC CGCTGCTTTA ATGAATTTAA TCAATCCATT AGCCAATGCC ATTATCATGG CCATGTTGGC GCATATCGAC CACAGCGCAG TGGCGGCCTT TGGTGCAGGC ACTCGCTTAG AGTCAGTGTT ATTAATCGTG GTGATGGCGT TATCGTCGAG CTTAATGCCC TTTATCGCAC AGAACTTAGG TGCAGGCCAG CCACAAAGGG CGAAAGAAGC CCTGCTGCTA TCGATAAAAT TTATCTTTAT CTTCCAAACC ATACTTTATA TTCCACTGAT CTTTTTGGCT GAACCTATCG CGCACTTATT CAGTACCGAT CCGCTGGTGA TCGAGTGGTT GAGTTTTTAC ATCTTAGTGC TGCCCTGCGC CTACGGCCCT TTGGGCATAG TGATTATTGT GGCGACCTCG CTCAATGCTT ACCACAGACC TATGAGTTCA CTGGTGATCA ACCTGTGCCG CTTAGTGCTA CTTATGCTGC CGCTGGCGGC TTTAGGATCC TATATAGGTG ACGTTAAAGG CCTGCTGCTG GCGCTACCTG TGACCAATAT TTTGATGGGA ATTGCTTGTT ACTGGCTGGC GCAGCGGATC TGTGAGCCGA CAAAGATCAC AACCGCTAAC GCCATTCGCG AGGGGTAA
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Protein sequence | MKDRHGLLTA PIGRVLLNMS LPNLIGIMTI LGFSLADTFF ISQLGTEALA AISFTFPVTL VISSIAIGIG AGVSTNLGRL IGSGNAHKAK VFLHDALLLT FGLIASLAAL GSIFIEPLFR LLGANDDSLP LIHDYMIYWY VGAPLLVLLM VGNQGLRSTG DTRSPAMIMA LAAVINLILD PLLIFGIGPF PRLEIQGAAI ATLFAWLVAL SLSGYLLIVR RKMLEWTVFD IDRMRANWTK LAHIAQPAAL MNLINPLANA IIMAMLAHID HSAVAAFGAG TRLESVLLIV VMALSSSLMP FIAQNLGAGQ PQRAKEALLL SIKFIFIFQT ILYIPLIFLA EPIAHLFSTD PLVIEWLSFY ILVLPCAYGP LGIVIIVATS LNAYHRPMSS LVINLCRLVL LMLPLAALGS YIGDVKGLLL ALPVTNILMG IACYWLAQRI CEPTKITTAN AIREG
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