Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0608 |
Symbol | |
ID | 5369863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 726613 |
End bp | 728559 |
Gene Length | 1947 bp |
Protein Length | 648 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640828806 |
Product | ABC transporter related |
Protein accession | YP_001364832 |
Protein GI | 152999151 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAGAAG TTCTGTTAAA TATTGTGGAT GTCAGCCGCT CTTTTATTGC CGGAGAGCAG GAGTTGACGG TACTAAAAAA CATTAATCTG CAAATCTGTC GTGGTGAATT GATTGCCATT ATTGGCGCTT CTGGTTCGGG TAAATCAACA TTAATGAACA TCCTTGGCTG TCTGGATAAA CCCAGTGCAG GTAGTTATTT CATTAATGGT CAGGACACAT CCCGTATGGA TGACAATGAA CTAGCCGCAC TGCGACGTGA ATACTTTGGG TTTATCTTTC AGCGCTATCA TCTTTTAGGT GATTTAACTG CGCAGGGTAA TGTAGAAGTA CCGGCATTAT ATGCCAATGA GGGGGCGCAA ACCCGACACG AAAAGGCAAA AAAACTACTG ACTCGTCTGG GATTAAGCGA TCGTTTAGAT CATAAGCCAA GCCAGCTAAG TGGTGGCCAA CAACAGCGTG TCAGTGTCGC CAGAGCTTTA ATCAATGGCG GTGATATTAT TCTGGCCGAT GAGCCAACCG GCGCGCTTGA TAGCAGTAGC GGCGAAGAAA TGATGAAGCT CATTCAAGAA CTCAATCGCG ACGGTCACAC CATTATTTTG GTGACACACG ATCCGCATAT TGCCGAATTT GCAGATCGCG TCATTGAGCT AAAAGATGGA GAAATCATTG CCGATAAACA AAAGCGTATC CCCGTAAAAG CAAACCAGCT AAGCACAGAC CAACAAGCTT CTAAAACGAG TAAGAAAATA AACTGGTCGC GTTATCTTGA AGCGTTAAAA ATGGCATTAA TTGCAATGTC CAATCACCGT TTGCGTACGT TTCTGACGAT GCTCGGCATT ATTATTGGCA TTGCTTCAGT GGTGTCTGTT GTCGCGCTAG GTGCAGGTTC GCAGCAATCG ATTTTGGACA ATATTGCTTC AATGGGCACT AATACTATTG AAATAAAACC AGGCACAGGG CGTGGCGATC GCCGGTCTGA ACGGGTTAGG TCGCTCACGG CAGACGATGC AAATGCGCTT AAAATATTGC CCTATGTGGA CAGCGTAACC CCAACCGTTA GGACCAATGT TGCCATACGT TATGCAAGTG AAACCGTCAC AGGCTCAATT CAAGGCGTGG GTACTGAGTA TTTTCGCGTT CGTGGTTATG CGTTGGCCAA AGGACAATAT TTTGCCGATG ATAGTATTGA TACGTTAGAG CAGGTTGCCG TCATTGACGC CAATACCGAT CAGACTCTTT TCCCTGACGG CAATGCGTTG GGTAGCGTCA TTTTTCTCGG TCGTCTACCT GTTCGTATTA TTGGCGTAAC AAAGCCAATT CAAAGTGTGT CCGACAATAG TGATGAACTG AATGTTTGGT TGCCGTACAC CACGGTGTCC GGGCGTATTT TTAGGCAAAA TTATGTTAAC GATATTACCG TAAGGATAGA TGCGAATGTA TCTAGCGATG CGGCAGAACA AGGCATTATC AGCTTATTGA CTATGCGCCA TGGTACGGTT GATTTTTTCA CTATAAATAC AGATACGATA CGAAAAAGCA TCGAAAAAAC ATCTGAAACC ATGACACTAC TGATATCAGC TATTGCGTTT ATCTCTTTGT TAGTTGGTGG GATTGGGGTA ATGAATATCA TGCTGGTATC GGTAACAGAG CGAACGCGCG AAATAGGTAT TCGTATGGCT GTTGGCGCTA GACAAACCGA TATTATGCGT CAGTTTTTGA TTGAAGCAGT ATTGGTGTGT TTTTGTGGTG GTGCATTGGG GATCGGACTT GCTTATTTTA TCGGCATGAT ATTTACCTAC ACAGGCAGCA GTTTTCAGAT GATCTATTCG AGTACGTCAA TTGTTGCAGC TTTTGCTTGT TCGACGTTAA TCGGGATTGT GTTTGGTTAT CTGCCAGCTC GAAATGCGGC TAAATTGAAT CCGGTAGATG CACTCTCAAG AGACTGA
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Protein sequence | MGEVLLNIVD VSRSFIAGEQ ELTVLKNINL QICRGELIAI IGASGSGKST LMNILGCLDK PSAGSYFING QDTSRMDDNE LAALRREYFG FIFQRYHLLG DLTAQGNVEV PALYANEGAQ TRHEKAKKLL TRLGLSDRLD HKPSQLSGGQ QQRVSVARAL INGGDIILAD EPTGALDSSS GEEMMKLIQE LNRDGHTIIL VTHDPHIAEF ADRVIELKDG EIIADKQKRI PVKANQLSTD QQASKTSKKI NWSRYLEALK MALIAMSNHR LRTFLTMLGI IIGIASVVSV VALGAGSQQS ILDNIASMGT NTIEIKPGTG RGDRRSERVR SLTADDANAL KILPYVDSVT PTVRTNVAIR YASETVTGSI QGVGTEYFRV RGYALAKGQY FADDSIDTLE QVAVIDANTD QTLFPDGNAL GSVIFLGRLP VRIIGVTKPI QSVSDNSDEL NVWLPYTTVS GRIFRQNYVN DITVRIDANV SSDAAEQGII SLLTMRHGTV DFFTINTDTI RKSIEKTSET MTLLISAIAF ISLLVGGIGV MNIMLVSVTE RTREIGIRMA VGARQTDIMR QFLIEAVLVC FCGGALGIGL AYFIGMIFTY TGSSFQMIYS STSIVAAFAC STLIGIVFGY LPARNAAKLN PVDALSRD
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