| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0556 |
|---|
| Symbol | |
|---|
| ID | 5373109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 641391 |
|---|
| End bp | 642095 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640828761 |
|---|
| Product | single-strand binding protein |
|---|
| Protein accession | YP_001364787 |
|---|
| Protein GI | 152999106 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0629] Single-stranded DNA-binding protein |
|---|
| TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00736875 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGTC GTGGTGTTAA CAAGGTAATT TTGGTTGGCA ATTTGGGACA AGATCCAGAA
GTGCGTTATA TGCCAAACGG TAATGCAGTC GCTAACATCA CAGTTGCGAC CAGCGAATCG
TGGAAAGACC AACAAGGTCA ACAGCAAGAG CGTACTGAAT GGCACCGTGT GGTTCTGTTC
GGCAAATTAG CTGAAATTAC AGGTGAATAC CTGCGTAAAG GTTCACAGGT TTACCTTGAA
GGTAAACTGC AAACCCGTAA GTGGAAAGAC CAAAGCGGTC AAGACCGTTA CAGCACTGAA
GTGGTTATCG ACCAAAGCGG TAGCATGCAA ATGCTAGGTA GCCGTGGTCA AGGTGGCCAA
GCACAAGGCG CGCCAATGGG CGGCGGCATG CCACAAAACG CAGGTTACCA ATCTGCACCA
CAACAAGCGG CACCAGCGCA AAATCAATAT GCGCCAGCGC CTCAAGCTGC ACCTGCTTAC
CAAGCGCCAG CTCAGCAACA ATATGCTGCG CCAGCACCTG CTCAGCAGCA ATATGGACAG
CAACAAGCTC AACCACAACA AGGTGGTTAT GCGCCTAAGC CACAAGCCGC TCCAGCGCCT
GCTTACCAAG CGCCAGCAGC ACCGGCACAA CGTCCAGCAC CACAACCACA GCAAAACTTC
ACTCCAGATT TGGATGATGG CTGGGATGAC GATATTCCGT TCTAA
|
|---|
| Protein sequence | MASRGVNKVI LVGNLGQDPE VRYMPNGNAV ANITVATSES WKDQQGQQQE RTEWHRVVLF
GKLAEITGEY LRKGSQVYLE GKLQTRKWKD QSGQDRYSTE VVIDQSGSMQ MLGSRGQGGQ
AQGAPMGGGM PQNAGYQSAP QQAAPAQNQY APAPQAAPAY QAPAQQQYAA PAPAQQQYGQ
QQAQPQQGGY APKPQAAPAP AYQAPAAPAQ RPAPQPQQNF TPDLDDGWDD DIPF
|
|---|
| |