| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0538 |
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| Symbol | metF |
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| ID | 5370101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 617964 |
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| End bp | 618851 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640828743 |
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| Product | 5,10-methylenetetrahydrofolate reductase |
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| Protein accession | YP_001364769 |
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| Protein GI | 152999088 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0685] 5,10-methylenetetrahydrofolate reductase |
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| TIGRFAM ID | [TIGR00676] 5,10-methylenetetrahydrofolate reductase, prokaryotic form |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTTTTC ATCACGCACA ACATTCACAA TCGCTGAACC AGAGTTTGTC TGAGCTTAAT
GGCGATATTA ATGTTTCTTT TGAGTTTTTT CCGCCATCGA CCCCCGAAAT GGAACAAATC
CTGTGGAACT CTATTCGTCG TTTAGAGCCG CTTAATCCTA AGTTTGTGTC TGTGACCTAT
GGCGCTAACT CAGGTGTGCG CGACCGTACC CACGGCGTGA TTGAGCGTAT TCAACAGGAA
ACCGACCTTG TTGCCGCGCC GCACTTAACC TTAGTGGATG CCAGCGATGA AGAGCTATTA
GAACTGGCTA AGCATTACTG GAAATCGGGC ATTCGTGACA TAGTAGCACT GCGGGGCGAT
TTACCTGCGG GCAGCCCTAA GCCAACTCGT TTTGCGGTGG ATTTAGTGCG TTTACTGCGC
TCAGTGGCAG ACTTTGATAT TTCCGTTGCA GCCTATCCAG AAGTGCATCC CGATGCGAGC
AATGCACAGG CGGATTTGAT CAACCTTAAG CGTAAGATTG ATGCGGGCGC TAGCCGTGCT
ATTACCCAGT TTTTCTTCGA TGTGGAATCT TACCTGCGCT TTCGTGACCG CTGCGTTGCC
GCCGGTATCG ACGTTGAAAT TGTGCCAGGT ATCTTACCTG TGACTAACTT TACCCAGTTA
AAACGTTTTG CGGGCATGAC CAATGTGTCG CTACCTAACT GGCTGCATAA GCAATTCGAT
GGTTTAGAAA ACGATGCCGG TACACGCCAA TTAGTGGGTG CAAACGTAGC GATTGATATG
GTTAAGGTGT TGTCACGTGA AGGCGTGAAG GATTTCCACT TTTACACCCT AAACCGCGCC
GAACTGACCT ATGCTATTTG CCATACGTTA GGTGTGCGTC CTAAATAA
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| Protein sequence | MAFHHAQHSQ SLNQSLSELN GDINVSFEFF PPSTPEMEQI LWNSIRRLEP LNPKFVSVTY
GANSGVRDRT HGVIERIQQE TDLVAAPHLT LVDASDEELL ELAKHYWKSG IRDIVALRGD
LPAGSPKPTR FAVDLVRLLR SVADFDISVA AYPEVHPDAS NAQADLINLK RKIDAGASRA
ITQFFFDVES YLRFRDRCVA AGIDVEIVPG ILPVTNFTQL KRFAGMTNVS LPNWLHKQFD
GLENDAGTRQ LVGANVAIDM VKVLSREGVK DFHFYTLNRA ELTYAICHTL GVRPK
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