| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0488 |
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| Symbol | |
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| ID | 5372654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 553665 |
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| End bp | 554885 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640828693 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001364719 |
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| Protein GI | 152999038 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00834812 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGATTT ATCAATACCG TGGACGCAGT GGTCAAGGTC AGTCTGTTAC GGGACAATTG
GATGCCGCGT CGGAAAGTGC TGCCGCTGAC ATGCTATTGG CGCGGGGGAT TATTCCCCTC
GAAGTCAAAG TCGCTAAAGT GGTTAAGTCA TTCTCACTGG CCCAGCTGTT TGGTGGAAAA
GTTGCGTTAG AAGAATTACA GATCTTTACT CGGCAAATGT ATTCTCTGAC TCGTTCTGGC
ATCCCGATTT TACGGGCGAT TGCGGGGTTG TCTGAAACGG CACATTCCCA GCGGATGAAA
GATGCGCTCA ACGATATTTC TGAGCAGCTC ACCGCAGGAC GGCCCTTGTC ATCATCCATG
AATCAACATC CCGATGTATT TGATTCCTTG TTTGTTTCTA TGGTGCACGT GGGAGAAAAC
ACCGGTAAGT TAGAGGATGC CTTTATTCAG CTTTCGGGTT ATATCGAGCG TGAGCAGGAA
ACGCGGCGAC GAATTAAATC GGCCATGCGT TATCCCATGT TTGTATTGAT TTCGATAGCA
CTCGCTATGG TGATCCTCAA TATCATGGTG ATCCCTAAGT TCGCCGAGAT GTTTTCCCGC
TTTGGCGCTG ACTTACCTTG GGCGACAAAA GTGTTGATAG GTACATCGAA TCTGTTTGTG
AATTATTGGG CGCTGATGTT GGTGGCGCTG ATTGGCACTA TCATTGGCAT CCGTTATTGG
CACCATACGG AAAAGGGCGA GAAACAGTGG GATAAGTGGA AACTGCACAT CCCCGCCGTA
GGATCGATTA TCGAGCGTTC GACGTTAGCC CGTTATTGTC GCAGTTTCTC TATGATGCTG
AGCGCTGGCG TGCCGATGAC GCAGGCCCTA AGTTTAGTGG CTGATGCGGT AGATAATGCC
TACATGCACG ACAAAATAGT CGGTATGCGC CGTGGGATTG AGTCTGGCGA CTCTATGTTA
AGGGTATCGA ATCAGAGTAA GTTATTTACG CCGTTGGTGC TGCAAATGGT GGCAGTGGGT
GAAGAGACGG GGCAAATCGA TCAATTACTC AATGATGCGG CAGACTTCTA TGAGGGCGAA
GTAGACTATG ATTTAAAGAA CCTCACCGCT AAATTGGAGC CTATTTTGAT CGGTTTTGTG
GCCGTGATTG TACTCGTGTT GGCCTTGGGG ATATACCTGC CCATGTGGGA TATGCTTAAT
GTGGTCAAGG GCGGTAAATA A
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| Protein sequence | MPIYQYRGRS GQGQSVTGQL DAASESAAAD MLLARGIIPL EVKVAKVVKS FSLAQLFGGK
VALEELQIFT RQMYSLTRSG IPILRAIAGL SETAHSQRMK DALNDISEQL TAGRPLSSSM
NQHPDVFDSL FVSMVHVGEN TGKLEDAFIQ LSGYIEREQE TRRRIKSAMR YPMFVLISIA
LAMVILNIMV IPKFAEMFSR FGADLPWATK VLIGTSNLFV NYWALMLVAL IGTIIGIRYW
HHTEKGEKQW DKWKLHIPAV GSIIERSTLA RYCRSFSMML SAGVPMTQAL SLVADAVDNA
YMHDKIVGMR RGIESGDSML RVSNQSKLFT PLVLQMVAVG EETGQIDQLL NDAADFYEGE
VDYDLKNLTA KLEPILIGFV AVIVLVLALG IYLPMWDMLN VVKGGK
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