Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0448 |
Symbol | |
ID | 5370248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 509283 |
End bp | 509858 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640828653 |
Product | hypothetical protein |
Protein accession | YP_001364679 |
Protein GI | 152998998 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4968] Tfp pilus assembly protein PilE |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCGTT TGCAGTCATC GAAGGGCTTT ACATTAATTG AGCTGGTTGT GGTCATTATC ATCCTTGGGA TCTTGGCCGT CGTCGCAGCA CCACGGTTTT TAAACCTAGG CCAAGATGCC CACGATGCCA GAGCCAAAAC CGCATTTGCG GCCTTTGCCT CTGGTGTTAA GCTTTATCAC AGTTGCTGGC TTGCGGGCGG TCACTCTGGT TATACCCAAG ATCTCGCCTG TTATGGTGAC GGAAAACTCG ACTCGACCAC CACAGGATTT CCACTGGGAA TAGAGACTGC AACCGCTGAT GCCGGTGCTA AATTGCAGGG CGATTATTGT GGTCAGTTAT GGCAAGGTCT TTTGGCTAAT AATGAATTTG TCATTGCCGA TCAATACTCT TGGCGCACAG TTCCCAATGT CGACATTGTT TACTGGTATG GTGCCGTCGA CATAAAAGAT CCCAATGCTT ACTGCATTTT CAACTATGTC TCGGACGATC GCAGCTTCGG CAGTGAAAAC TGGGATTTAA AATACTATCC CTTCGATGGC CGCACTATTG TAGGTCGATC CACACTTTCC CAATAA
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Protein sequence | MSRLQSSKGF TLIELVVVII ILGILAVVAA PRFLNLGQDA HDARAKTAFA AFASGVKLYH SCWLAGGHSG YTQDLACYGD GKLDSTTTGF PLGIETATAD AGAKLQGDYC GQLWQGLLAN NEFVIADQYS WRTVPNVDIV YWYGAVDIKD PNAYCIFNYV SDDRSFGSEN WDLKYYPFDG RTIVGRSTLS Q
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