| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0411 |
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| Symbol | |
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| ID | 5373768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 468638 |
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| End bp | 470524 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640828617 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001364643 |
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| Protein GI | 152998962 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTAAAC GAAACTCGTC ACTCATACTC TTGCTGTGGC TATGGATGTG TTCAACACCT
TCATTCGCAA CCCTATTAAG CATTGATGAA TCAACGGCGA CCCCGTTAAA CCTTACGCCT
TGGTTGATGG TGAGCCACCC CACTTCGGCG AAGGAATTTA CCGAGATCCA AGCCTTGCCA
AAAACGGATT GGCATAACTT CACCAATAAA GACATTCAAA AACTCAGCGG CCATGATTTT
TGGCTGAGTT TCAGCTTAAC CAGCCCAGAC GATGCACTTT CACGTATTTT AGCGTTAGAT
AACCCCTTGT TAGACAAGGT GACTATCTAT CATTTAGTCA ATAATAAGCT CGCTAAAACT
GTGCTTATGG GCGACACCTT TCCCTATAAC GAACGGCCAT TTTTGAGCAA TATCTTCCTG
TATCCTTTTA AACTCAACAT GGATGATACC CATACTTTTT ATTTGCATAT TCAGACCGAA
GGCAGCGCTG CGGTATCGTT AAATCTCTGG TCATCTAACG ACTTAGCCAA GATTGCTGAA
TCAACCGCCG TCGAACATGG TTTCCAACTT GGCGTACTGG CCGCGATTGG TATCTTTAGC
CTCTTTATTG CGATTGCATC GGGCTCATTC AGTTACAGCT ATTATTCCGG CTACGTGCTG
AGCATGACCT TGCTCGTCGC TACCATCAAC GGTTTTGCCT TTCGATTCCT CTGGCCAAAT
TGGCCAATAT TACAGCAAGT TATGGTGCCG TTTTTACTGC CAATCGTTAT GGCGTTTGCG
CTGATGTTTA CTGAAAAAAT ATTACAGCTC AAATATTTAA ACCGCCGCAT GCTGCTGACT
TGTCGCTATA GCGCTGTGTA TATCCTATGT ATTGGACTCG CCACGCCTTT TATCCAATAT
GGAACGGCGC TCTATATCGA GATCATTTCC GTTGCAGTGC TCAGCCTGGT ACTTATGGTC
TTTGCTATTA CTCAGGCCAT CAATGGCCAT AAACTGGCAC GTATGTACAC TATTGGCTGG
GTGAGTATGC TGACAGGAGC TTGCATCAGT AGCTTGTTGT ATCTCAGCGT GATTGACCTC
AATTTAAAAC CGCAAACGCC TGTCATGCTC GGCCTGACGT TTGAAATCAT CTTTATGTCT
TTGGTGCTTG CCATCCGCTA TAACGATGAA CGCAAAGCTA AGCTACGTAT TCAGCAAGAG
GCCTTGAAGC AAGCACAGAA AATTCGCAGT GCGCGGGAAG AAGCCCTAAA AGCGGAAGCC
GAGAGCAATG AGAAACTCGA GCAAATGGTG CAAGAGCGCA CCTTAGAACT TGAAATCACC
CTCAGAGAAT TACATGAGGT AAACCAAAAG CTCACCGAAC AAAGCACTAT CGACAGTTTA
ACTGGGGTTA AAAACCGCAG TGCTTTCGAT AAACGTTTGA TCGCTGAAAG CCGGATCAGC
CGCAGGCAAG AAACACCCAT AGCCCTGTTG ATGCTCGATA TCGATCGCTT CAAGCTGATC
AACGATAGAT TCGGCCATCT TGCAGGCGAT GAAGCCTTAC GAACCATAGC CCAAACATTA
CAGCAACATT TAAAGCGGCC AACAGATCTC GTATCACGTT ATGGAGGCGA GGAGTTTGCT
ATCATCCTGC CTAATACAGC AGAAGATGGT GCACTCCAAG TCGCTGAAAC GATAAGAGAC
GCAGTTGCCT CAATCAATTT CGAATGGGAA GGTGTAGCGA TACCTTTGAC TATCAGTATC
GGAGTCAGTG CCGATATCGT CACTAACGAT CAGCACAGCA CCAAATTATT AGAACAAGCG
GATAAAGCCC TCTACCAAGC GAAAAATGGT GGACGTAATC AAGTCAGCTT ATTTTCATCA
GTTCAAGCAG GACCAGTACC TAATTAG
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| Protein sequence | MLKRNSSLIL LLWLWMCSTP SFATLLSIDE STATPLNLTP WLMVSHPTSA KEFTEIQALP
KTDWHNFTNK DIQKLSGHDF WLSFSLTSPD DALSRILALD NPLLDKVTIY HLVNNKLAKT
VLMGDTFPYN ERPFLSNIFL YPFKLNMDDT HTFYLHIQTE GSAAVSLNLW SSNDLAKIAE
STAVEHGFQL GVLAAIGIFS LFIAIASGSF SYSYYSGYVL SMTLLVATIN GFAFRFLWPN
WPILQQVMVP FLLPIVMAFA LMFTEKILQL KYLNRRMLLT CRYSAVYILC IGLATPFIQY
GTALYIEIIS VAVLSLVLMV FAITQAINGH KLARMYTIGW VSMLTGACIS SLLYLSVIDL
NLKPQTPVML GLTFEIIFMS LVLAIRYNDE RKAKLRIQQE ALKQAQKIRS AREEALKAEA
ESNEKLEQMV QERTLELEIT LRELHEVNQK LTEQSTIDSL TGVKNRSAFD KRLIAESRIS
RRQETPIALL MLDIDRFKLI NDRFGHLAGD EALRTIAQTL QQHLKRPTDL VSRYGGEEFA
IILPNTAEDG ALQVAETIRD AVASINFEWE GVAIPLTISI GVSADIVTND QHSTKLLEQA
DKALYQAKNG GRNQVSLFSS VQAGPVPN
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