| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0397 |
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| Symbol | |
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| ID | 5370182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 444774 |
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| End bp | 446156 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640828596 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
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| Protein accession | YP_001364629 |
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| Protein GI | 152998948 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCCTC TTTCTCTCGA AACCCTAAGT CAACACTTAG GTACGTTTCG AGTCGGTGAC
GACGTCACCA TCGAAGATTT AAGCAGTGAT AGCCGCAAAA TCGGCGCTGC AACCCTGTTT
GTTGCCTTAA AGGGTGAGCG TTTTGATGGC CATGATTTTG CTGCAACCGC TATTGAGAAC
GGCGCCGCGG CGTTAATGGT CGAGCGCGAA TTAGCCTTTG ATATTCCGCA GCTGATTGTG
CCCGATTGCC AAAAAGCCAT GGGCGCGATA GGGGCTTATG TCCGTGACCA AATCAATCCG
ATTTGCGTGG CGTTAACAGG CTCAAACGGT AAGACCAGCG TGAAGGAAAT GATCGCGACC
ATTCTGTCGG CAAAGCATCA AATCCTCTAT ACCGCTGGTA ACTTCAACAA TGAAATCGGT
GTGCCGCTTA CCTTGCTGCG TTTAACGCCA GCGGATGAGT TTGGAATATT CGAACTCGGC
GCAAACCATA AAGGTGAAAT TGATTACACC TCAGGACTCG TGCGTCCGAA CGTGGCGCTG
GTGAATAACG TCGGCAGCGC CCATTTAGAA GGATTTGGAT CGCAAGCAGG TGTTGCGCAG
GCTAAGTCGG AAATTTTTAA TCATCTGCAG GCCGATGGCA CCGCCATCAT CAACGCCGAT
GATGCCTTCG CCGATTTTAT GAGCGTTAAG GCAAGACCTT ATAAGCAACT GAGTTTCTCC
CAGCAAGATG GTGCTGCTAA ACGTCATATC GATGTCATCG CTACAGGTCA TAAGGCCAAT
GCCGATGGCT GCTATCGTTT TATGCTCAAT TATTTAGGTG AATCTTGCCA AGTAGTCTTG
CCACTGGCGG GCCGCCATCA GGTGAGTAAT GCTCTCGCCG CTGCAAGTGT TTGTATTGCC
TTGGGATTAA GTTTGACAGA GATCGCCGAA GGCTTAAGCC AATTAACACC AGTGAAAGGG
CGCATGCAGC CGAGTCAATT GGGACGCGTA CGTCTAATCG ACGATAGCTA TAACGCGAAT
CCTGTATCCG TTGGGGCGGC AATCGCTTGG TTAAAGGAAA TTTCTGAAAA TCGCTGTCTG
GTACTGGGAG ATTTAGGAGA ATTAGGCGAC AATGCGCCCC TTTTACACGC TGAACTAGGG
CAACTGGCCA AGCAACAGGG GATAGATGCC TTGTTTTGCA CCGGAACGTT AAGTCAGCAC
ACGAGCCAAG CTTTCGGTGC GGAGCACTAT GACAGTGTGG CGACGTTAGT AGAAAAACTC
ATAAAGCATA TTAACCAGTT ACCGGGACAG GTAACGGTTC TCGTTAAAGG TTCACGTAGC
GCCGCCATGG AGCGGGTCGT GGATGGACTA ACAGTAGCCT TCGGGCGTGG GGAGTTAGTG
TAA
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| Protein sequence | MIPLSLETLS QHLGTFRVGD DVTIEDLSSD SRKIGAATLF VALKGERFDG HDFAATAIEN
GAAALMVERE LAFDIPQLIV PDCQKAMGAI GAYVRDQINP ICVALTGSNG KTSVKEMIAT
ILSAKHQILY TAGNFNNEIG VPLTLLRLTP ADEFGIFELG ANHKGEIDYT SGLVRPNVAL
VNNVGSAHLE GFGSQAGVAQ AKSEIFNHLQ ADGTAIINAD DAFADFMSVK ARPYKQLSFS
QQDGAAKRHI DVIATGHKAN ADGCYRFMLN YLGESCQVVL PLAGRHQVSN ALAAASVCIA
LGLSLTEIAE GLSQLTPVKG RMQPSQLGRV RLIDDSYNAN PVSVGAAIAW LKEISENRCL
VLGDLGELGD NAPLLHAELG QLAKQQGIDA LFCTGTLSQH TSQAFGAEHY DSVATLVEKL
IKHINQLPGQ VTVLVKGSRS AAMERVVDGL TVAFGRGELV
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