Gene Shew185_0388 details

Gene Information

• Locus tag: Shew185_0388
• Symbol: leuD
• ID: 5369742
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: +
• Start bp: 434378
• End bp: 434983
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640828587
• Product: isopropylmalate isomerase small subunit
• Protein accession: YP_001364620
• Protein GI: 152998939
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR00171] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 42
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAACCTT TTACGACCCA TACCGGGCTT GCGGTCATGA TCGACAGCAC CAATATCGAT 
ACGGATCAGA TCATTCCGAA ACAGTTTTTA TCTAAGGTGA CGCGCGATGG TTTTGGCGTG 
CACTTATTTC ACGACTGGCG TTATTTAGAT GATGCGGGCG ATCAGCCTAA TCCTGAGTTT 
TCATTGAATC AAAGCCGTTA TAAAGGCGCG TCGATTCTTT TGGCACAGGA AAACTTTGGT 
TGTGGTTCAA GCCGCGAACA TGCGCCTTGG GCGCTGGTAG ACTTTGGTCT GCGTGCGATT 
ATTGCGCCGA GTTTTGCTGA CATTTTTTAC GGTAACTCAA TCAATAACGG CCTATTACCT 
GTGGCGTTAA CCCACGCGCA GGTGCGCCAA TTAATGGATG AAGTGGCGGC AGAAGCTGGT 
GCACAAATTA CGGTTGATCT TACAAGCTGC AAAGTGATTT CACCGTCGGG CGCCGAGTTT 
AGTTTTACGC TGGCAGAATC GGCAAGGCAT AAGCTGCTAA ACGGTTTAGA TGCAATTGGG 
TTGACCTTGT CCCACGCTGC GCAAATCAGT CAGTACGAAA CCCAAATCCA AGGTTGGCGC 
CGTTAG 

 

Protein sequence

MQPFTTHTGL AVMIDSTNID TDQIIPKQFL SKVTRDGFGV HLFHDWRYLD DAGDQPNPEF 
SLNQSRYKGA SILLAQENFG CGSSREHAPW ALVDFGLRAI IAPSFADIFY GNSINNGLLP 
VALTHAQVRQ LMDEVAAEAG AQITVDLTSC KVISPSGAEF SFTLAESARH KLLNGLDAIG 
LTLSHAAQIS QYETQIQGWR R