Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0348 |
Symbol | |
ID | 5372247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 389342 |
End bp | 390286 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640828548 |
Product | CaCA family Na(+)/Ca(+) antiporter |
Protein accession | YP_001364581 |
Protein GI | 152998900 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0530] Ca2+/Na+ antiporter |
TIGRFAM ID | [TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein [TIGR00378] calcium/proton exchanger (cax) |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000268506 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCATTA CACTATCGAT TATTGGCGGT TTTATTATTT TAACCTTAGG CGCCGAAGCC CTAGTGCGTG GCGCGAGTGC TATCGCCCTA CGCTTAGGTA TTACGCCACT TATCATAGGT TTAACTATTG TTGCCTTTGG TACTAGCGCA CCAGAACTGG CCGTGAGTGT CAAATCTGCC CTCGCCGGAA ACAGTGGTAT CGCCTTAGGT AACGTTATCG GTTCTAACAT TGCCAACATA GGTTTGATCT TAGCGATCAC GGCGCTAATC CGCCCTATCC AAGTGCAATC CCAAGTGGTG AAGCGCGATA TCCCTTTGAT GATCTTGGCG TCTATACTGT TCTGGGGACT CTTGTTAGAC GGCGAACTCA GCCTTATTGA CGGTGTGGTA CTGCTGTCTC TACTGGTCGG ATATTTAACC TTTAGCTATA TCAGCTCGAA AAACAGCAAG AATGAAGAAG AGATTGAAGC GGGGCCGAAT AACCCACTGC TTTCTGGCCT GTTCATCCTA GTCGGCATTA GCATGTTAGT TGGCGGCGGT ATTCTGTTTG TAAACGGCGC AGTCGATTTA GCGAAAACCT TCGGCGTGAG TGAAGTCATT ATCGGCTTAA CGATCGTGGC GATTGGTACC AGTATGCCAG AGTTAGTGAC CTCAGTGATT GCGGCACTAA AAGGTCAAAG CGATATCGCT ATCGGTAACG TTGTGGGTTC TAACCTGTTC AATATTTTGG GCATTTTAGG TGTTACTGCC ATAGTTCATC CAGTATCGTC ACTCGGTTTC CAACCCTTCG ACTTTATGGT GATGTTAGCT TTAGCCATAG TGATTCTGCC TTTTGCATGG ACGGGATTAC GCATCGGCCG CCGCGAAGGT TCTGTGCTGC TACTGACCTA TTTAGGTTAT ATGGGTTACC TGATTAACCA AGCGAGCGCT CAAGCTTTGG TATAA
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Protein sequence | MLITLSIIGG FIILTLGAEA LVRGASAIAL RLGITPLIIG LTIVAFGTSA PELAVSVKSA LAGNSGIALG NVIGSNIANI GLILAITALI RPIQVQSQVV KRDIPLMILA SILFWGLLLD GELSLIDGVV LLSLLVGYLT FSYISSKNSK NEEEIEAGPN NPLLSGLFIL VGISMLVGGG ILFVNGAVDL AKTFGVSEVI IGLTIVAIGT SMPELVTSVI AALKGQSDIA IGNVVGSNLF NILGILGVTA IVHPVSSLGF QPFDFMVMLA LAIVILPFAW TGLRIGRREG SVLLLTYLGY MGYLINQASA QALV
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