Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0314 |
Symbol | rbn |
ID | 5373329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 356645 |
End bp | 357616 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640828514 |
Product | ribonuclease BN |
Protein accession | YP_001364547 |
Protein GI | 152998866 |
COG category | [S] Function unknown |
COG ID | [COG1295] Predicted membrane protein |
TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.321317 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACTAAGA AGATAGAACT GGCACAAATT CGCGTCTTAT TCCTCGGGAT CTGGCACTTC CTGCTGCATT TAAGGCGGCG TTTAGTGGAA GATCAGATCA ATATTCGCGC CGGACACTTG GCCTATGTCA CGCTATTGTC ACTCGTGCCT ATGGTGGCCG TGACTATGTC TATGTTGTCG GCTTTTCCGG TGTTTAAAGG CATACGTGGG CAGATAGAAG GCTTTGTTTA CGAAAACTTT TTACCCGCTG CTGGCGACAC AGTGCAAGTG TATATCAATG AATTTGTGGG CAATGCGTCT AAGGGCACAG CCGTGGGGAT CGCGGCCTTA GTGGTGGTTG CCATTATGCT GATTTCCGCC ATCGACAAAT CCCTCAATAA CATTTGGCGC ACTAAAGAGA AGCGTTCCGT GGTGGTCGCA TTTTCAATGT ATTGGATGGT GCTGACGTTA GGGCCGGTAT TGGTCGGGGC GAGTTTGGTC GCATCCTCCT ATGTGATTTC ACTGAAGGTG TTTGAAGCTG AAGCTTTATC GGGCATGTTG CCGATTTTTA TTGCGCGCTT GCCCATGTTG TTTTCAGTTG CCGCATTCTT GCTGTTATAC ATGGTGGTGC CGAATCAGAA GGTGAAGTTT TTACATGCAT TATTGGGGGC GATTGTGGCC GCGCTCTTGT TTGAGCTAGG TAAAAAAGGC TTTGCCTTGT ACGTGACTCA GTTTCCAAGT TATGAAGCCA TCTACGGTGC GCTCGCGACG ATCCCCATAG TGTTTGTCTG GGTGTATTTA TCGTGGATGA TAGTGTTGCT CGGCGCGGAG ATTACCGCGG CTATGCCAGA ATATTTAGAT TATGAATCGA GCTCAGATGA CGAAACGGCC CTGAATGCCA AGCCATTAGC AGATGCCAGC CAAGGTGATT CGCCGTCAGT ATTAACGTCG GCAGAGGTGA CGGCACTCAA GGCCGTGGCG AAATCGGAAT GA
|
Protein sequence | MTKKIELAQI RVLFLGIWHF LLHLRRRLVE DQINIRAGHL AYVTLLSLVP MVAVTMSMLS AFPVFKGIRG QIEGFVYENF LPAAGDTVQV YINEFVGNAS KGTAVGIAAL VVVAIMLISA IDKSLNNIWR TKEKRSVVVA FSMYWMVLTL GPVLVGASLV ASSYVISLKV FEAEALSGML PIFIARLPML FSVAAFLLLY MVVPNQKVKF LHALLGAIVA ALLFELGKKG FALYVTQFPS YEAIYGALAT IPIVFVWVYL SWMIVLLGAE ITAAMPEYLD YESSSDDETA LNAKPLADAS QGDSPSVLTS AEVTALKAVA KSE
|
| |