Gene Shew185_0301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0301 
Symbol 
ID5373141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp341649 
End bp342845 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content50% 
IMG OID640828502 
Productsodium:dicarboxylate symporter 
Protein accessionYP_001364535 
Protein GI152998854 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGCAAA AGATAAAACC TTATAAAGAT TCCATCGTGC TGCTCACCGC GTTATTGTTG 
GGCGGCCTGC TCGGTGTCGG TTTGCCAGAA CTGGCGCTCA AGTTCAAACC TTTAGGGCAA
ATTTTTCTAA ACCTGTTGTT TATGATTATC GTACCACTGG TCGCCATTAG CGTGACCTCC
TCCATTGCTC GCATGACGGA TTTGAAGAAA CTCGGCGCTC TGTTAGTGTC AATCATGGCG
GTGTCGATTG TGATGGCGAT TATCCCCGCC GTGGGCATTA TCGGGCTGGC CTTATTTTTC
GACCCCGCCC AAGGTGTTAC CTTAGATCTC AATCAAACCA TCAGCGATAC TGCGGGGACG
ATGGATTTTG TCGGCCTGCT GACCACCAAT GACTTTTCAG GTTTATTATC AAAATCCAAT
ATCTTAGCCC TGATCATCAT GTCGGTTATT GCGGGGATTG CGATCGGTCA ATCGGGGGAA
GATGGCAGAA AAGTCTCGGC ATTACTCGAC AGTTTTAATA CCGTCATCAT GAAGATAGTC
TCGATCATTA TGGTGGCAGC GCCCGTGGGA CTCGGTGCCT ATTTCGCCTC TACAATGGCA
AGCCAAGATC CGCAGCTTGT TATCACCTTT GCCCGCGCAG TTGGCCTGTT TATGGTCGCC
TGTTTTATTT ATCTAACCGT GGGTTCTACC TTTTACGCTT GGCTTGGCGG TGGCACTCAA
GGGGTTAAAC AATTCTGGCG CTTCGCCCTC GAACCTGCAG TGACTGCACT GGGCACCACA
TCATCACTCG CCACCCTACC GGTCACCTTG AGAACCGCGC TGAAGATGGG CATTAAACCC
GAAATCGCCG ACATCAGCCT GCCATTATTG GTCAATTTAA ATAAGGGCGG CGCCTCAATC
ATCACAGCCC TAAAAATCGT GTTTATCTAC TCGTTACTCG GATTAGATTT CACCGTCGAT
GTGTTTATGG TGACCATACT GATCTCGGTT CTATCGGCCT TTATCATAGG CGGCGTGCCG
GGCGGCGCTT TCCTCGGAGA GATTTTTATC GTCACGACCT TAGGCTTGCC AATGGAAACC
ATCCCGATTT TAGTGGTGAT AGGGGCGATT ACCGATGCGC CATCGACGGT CATTAACGTG
GTACACGACT TGAACGCCTG TCAGATCATC GAGCGCCTAA ATCGTAAACG ACTCTAA
 
Protein sequence
MWQKIKPYKD SIVLLTALLL GGLLGVGLPE LALKFKPLGQ IFLNLLFMII VPLVAISVTS 
SIARMTDLKK LGALLVSIMA VSIVMAIIPA VGIIGLALFF DPAQGVTLDL NQTISDTAGT
MDFVGLLTTN DFSGLLSKSN ILALIIMSVI AGIAIGQSGE DGRKVSALLD SFNTVIMKIV
SIIMVAAPVG LGAYFASTMA SQDPQLVITF ARAVGLFMVA CFIYLTVGST FYAWLGGGTQ
GVKQFWRFAL EPAVTALGTT SSLATLPVTL RTALKMGIKP EIADISLPLL VNLNKGGASI
ITALKIVFIY SLLGLDFTVD VFMVTILISV LSAFIIGGVP GGAFLGEIFI VTTLGLPMET
IPILVVIGAI TDAPSTVINV VHDLNACQII ERLNRKRL