| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0286 |
|---|
| Symbol | |
|---|
| ID | 5373064 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 325627 |
|---|
| End bp | 326304 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640828487 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001364520 |
|---|
| Protein GI | 152998839 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAC TTTTAGTTGA AGATGATGCG ACGACGATTG ATTACATCGT CAAAGGATTT
CTTGAGCAGG GCCACAATAT CGAAACGGCG AGCGATGGCC ACCAAGGTTT GTCACTCGCC
ACGAGTAGTC AGTACGATCT CGTGATCCTC GACCGCATGT TACCCCAGCT CGATGGCTTG
AAATTATTGG CCGCCTTAAG GGCAACGGGC AATCAAACCC CAGTGCTGAT TTTATCTGCC
TTAGCGCACG TTGATGAGCG AGTGAAAGGC TTGCGCGCGG GCGGCGACGA CTATATGACT
AAGCCGTTTG CCTTCTCTGA GTTATTAGTA CGCGCCGAAA AACTCATGCA CCGTGGCCAA
TCTGTGCCAG TCACCACAGA TCTTGTTGTC GGTGGCTTGA AGATGGAATT ACTGACCCGT
AATGTGACGT TAGACGGGCA AGAGTTGATG CTGCAGCCGA AAGAGTTCCA GTTACTTAAG
TATCTAATGG AACATGCGAA TCAAGTGATT AGCCGCACCT TGTTGTTCGA AGCGGTGTGG
GATTATCACT TCGACCCACG CACGAACGTT ATCGATGTGC ATATCGCAAA ATTACGCCGT
AAATTTGAAG AGTTAGGCCA TGGCGAGCTT ATCGAAACCG TGAGGGGAGC GGGTTATCGC
TTACGACAAA GGCATTAA
|
|---|
| Protein sequence | MKILLVEDDA TTIDYIVKGF LEQGHNIETA SDGHQGLSLA TSSQYDLVIL DRMLPQLDGL
KLLAALRATG NQTPVLILSA LAHVDERVKG LRAGGDDYMT KPFAFSELLV RAEKLMHRGQ
SVPVTTDLVV GGLKMELLTR NVTLDGQELM LQPKEFQLLK YLMEHANQVI SRTLLFEAVW
DYHFDPRTNV IDVHIAKLRR KFEELGHGEL IETVRGAGYR LRQRH
|
|---|
| |