| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0254 |
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| Symbol | |
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| ID | 5369890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 293625 |
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| End bp | 294311 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640828455 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001364488 |
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| Protein GI | 152998807 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000326652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCGGA TATTATTAAT CGATGACGAT CTGGGTTTAT CTGAGCTGCT AGGGCAACTG
CTCGAGTTAG AAGGGTTTCA ATTAACCTTG GCCTACGACG GTAAACAAGG TTTAGATCTG
GCACTGAGTT CGGATTACGA TCTGATCTTA CTCGATGTCA TGCTGCCTAA ATTGAACGGC
TTCGAAGTGC TGCGTGCACT GCGTCAGCAC AAGCAAACCC CAGTATTAAT GCTGACCGCT
CGCGGCGATG AAATCGATCG CGTTGTTGGG CTTGAGATAG GCGCCGATGA TTATCTGCCA
AAGCCGTTTA ATGACAGAGA GTTAATCGCC CGTATCCGCG CCATTATTCG TCGTTCGAAC
TTAACAACCC AAGAAATCCA TGCCGCGCCC GCACAAGAAT TTGGCGATTT ACGCTTAGAC
CCATCGCGCC AAGAGGCTTA CTGTAACGAG CAGTTGATCA TACTTACAGG CACAGAATTC
ACTCTGCTGC ACATCCTAGC ACTGCACGCT GGCGAGTTGA TGAACAAGGA AGAGTTAAAC
GAGAAAGTGC TCGGCAAAAA ACTCATGCCC TTCGATCGCA GCTTAGACAT GCATTTATCG
AATCTACGTA AAAAACTCCC CGAGCGTAGC GATGGGCGGC CAAGGGTGAA AACCATCCGT
GGCAAAGGTT ATATTTGGCT TCCATAA
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| Protein sequence | MSRILLIDDD LGLSELLGQL LELEGFQLTL AYDGKQGLDL ALSSDYDLIL LDVMLPKLNG
FEVLRALRQH KQTPVLMLTA RGDEIDRVVG LEIGADDYLP KPFNDRELIA RIRAIIRRSN
LTTQEIHAAP AQEFGDLRLD PSRQEAYCNE QLIILTGTEF TLLHILALHA GELMNKEELN
EKVLGKKLMP FDRSLDMHLS NLRKKLPERS DGRPRVKTIR GKGYIWLP
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