| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0228 |
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| Symbol | |
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| ID | 5373091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 262959 |
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| End bp | 263609 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640828425 |
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| Product | cytochrome c biogenesis protein CcmA |
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| Protein accession | YP_001364462 |
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| Protein GI | 152998781 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component |
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| TIGRFAM ID | [TIGR01189] heme ABC exporter, ATP-binding protein CcmA |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0024682 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGACAAATA TAACTAAAGA AACCACATTA GTGTCAGCCA GCAAGCTGAC CTGTATCCGC
GAAGAACGCA TCCTGTTTGA TGAGTTAAGT TTTGATATTA ATGCCGGTGA TATTGTTCAA
ATTGAAGGCC CTAACGGCGC GGGCAAAACC AGTTTATTAC GCATATTGGC AGGTCTTTCT
CGCCCCTATG CCGGACAAAC CTTTTACAGA AATGAAGACA TAAACCGCTG CCGTGATGAA
TACAATGAAG ATCTCTTGTA TCTCGGCCAT TTAGCGGGAG TGAAATGCGA GCTTACCGCC
GAAGAAAACC TTAATTTCAA TTTAAGAATC AGTGGCTATG ATGACTTTGA TACCTCAGCC
ATTTTAGCCA AAGTAAACTT AACAGGTTTT GAAGAGGCGC TTGCCGGACA TTTATCCGCA
GGCCAGCATC GCAGAACCGC GCTATCGAGA TTGTGGCATA GCAATTGTAA AATTTGGATC
CTTGACGAAC CTTTTACCGC GATCGATAAA AAAGGCGTCG AAGAGCTGGA GCAATTATTT
ATTCAGCATG CGGATAATGG TGGTTGTGTG ATCCTCACAA CTCACCAAGA TATGGGCATT
ATCAAAGATG ATAGGCTTCG TAAAATTCGT CTAGATTATC GCTTCATATA A
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| Protein sequence | MTNITKETTL VSASKLTCIR EERILFDELS FDINAGDIVQ IEGPNGAGKT SLLRILAGLS
RPYAGQTFYR NEDINRCRDE YNEDLLYLGH LAGVKCELTA EENLNFNLRI SGYDDFDTSA
ILAKVNLTGF EEALAGHLSA GQHRRTALSR LWHSNCKIWI LDEPFTAIDK KGVEELEQLF
IQHADNGGCV ILTTHQDMGI IKDDRLRKIR LDYRFI
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