| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0202 |
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| Symbol | rpsC |
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| ID | 5370198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 249399 |
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| End bp | 250091 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640828399 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_001364436 |
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| Protein GI | 152998755 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000000360171 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGACAGA AAGTACATCC TAATGGTATC CGTCTGGGTA TCACCAAGCC TTGGATCTCT
ACCTGGTACG CAGATAAATC AGATTACGCA AGTAACCTGA ACAGCGACTG GGAAGTGCGT
AAGTTTCTTG TAGAGAAATT ACAAGCTGCT TCAGTATCTA AGATTGTTAT CGAGCGTCCA
GCGAAAAGCA TCCGCGTTAC CATTCACACT GCCCGTCCAG GTGTTGTGAT CGGTAAGAAA
GGTGAAGACG TTGAAGTATT GCGTGCTGCA GTGTCAAAAC TTGCTGGCAC TCCTGCTCAA
ATTAACATCG CTGAGATCCG TAAACCTGAG CTAGATGCCA AATTAGTTGC TGACTCAATT
GCACAGCAAT TAGAGCGTCG CGTAATGTTC CGTCGTGCTA TGAAGCGCGC AGTTCAAAAC
GCAATGCGTA TTGGTGCTCA AGGTATCAAA GTACAAGTTA GTGGCCGTTT AGGCGGAGCT
GAGATTGCGC GTGACGAGTG GTATCGTGAG GGTCGTGTAC CTTTACATAC TTTGCGTGCT
GATATCGACT ATTCTACATC TGAAAGTCAC ACCCAATACG GTGTGATTGG CGTTAAAGTT
TGGATCTTCA AAGGTGAAGT TCTAGATGGA ATGCTGCCAC AGATTGAAGA ACCGAAGCAG
CAGCAACCTA AGCGCAAGCC TCGTGGTAAA TAG
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| Protein sequence | MGQKVHPNGI RLGITKPWIS TWYADKSDYA SNLNSDWEVR KFLVEKLQAA SVSKIVIERP
AKSIRVTIHT ARPGVVIGKK GEDVEVLRAA VSKLAGTPAQ INIAEIRKPE LDAKLVADSI
AQQLERRVMF RRAMKRAVQN AMRIGAQGIK VQVSGRLGGA EIARDEWYRE GRVPLHTLRA
DIDYSTSESH TQYGVIGVKV WIFKGEVLDG MLPQIEEPKQ QQPKRKPRGK
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