Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0174 |
Symbol | |
ID | 5373099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 213117 |
End bp | 214223 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640828362 |
Product | stearoyl-CoA 9-desaturase |
Protein accession | YP_001364408 |
Protein GI | 152998727 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1398] Fatty-acid desaturase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.18166 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAC CCCCTATCAT CTGGCTTAAT GTCAGTCTGT TTGCCATCAC TTTCCTCAGT GCGGTGATCT TAGTTCCATG GCGCGGTATT GTTCACGGCT ATGGCGCCAG TGAATGGATC GCTTTTATTG TCTTAGCCTT TGCCAGTGGC CTGTCGATCA CCGCAGGTTA TCACAGACTG TGGTCACACA AGGCCTATAA AGCCCATCCA GCCGTGCGGT TTATGTATGC ACTCGGTGGC GCTTTAGCAT TACAAAACAG TGCATTACAT TGGGCATCCG ATCACAGAAT TCACCACAAG CACGTAGACG ACAACGACAA AGACCCGTAC TCAGCCAAAA TGGGATTCTG GTACAGCCAT ATCGGTTGGA TGCTGCGTGA GTATCAGTCG CAACGCTATC ATGATTATCA AAATGTGCGC GATCTGCAAA ATGACCGTAT CGTTATGTGG CAACACAAAC ATTACCTCGC ACTCGTATTA CTGATGAACA TTGGACTGCC TGCCCTGCTC GGCTGGCTGA ACGGCGATGT ACTGTCTATG TTATTGATGG CAGGTCTACT GCGTTTAGTG GTGGTGCATC ACTGCACTTT CTTCATCAAC TCTTTAGCGC ACGTGTGGGG CAGCCAGCCT TATACCGATA AGAACACTGC CCGTGATAAT GGCTTTCTCG CCATGCTGAC CTACGGTGAG GGTTACCATA ATTTCCATCA CATCTTCGAA AATGACTATC GTAATGGCAT TAAATGGTGG CACTACGATC CAACTAAATG GTTGATTAAG TCATTATCTT GGTTGGGGTT AGCCAAGGAC TTGCGTACGA GTCCACAGGA ACGTATCGAG AGCGCACGCT TGCAGATGCA GCTGCTGCGG ACCAAGAATA AAGTCGTGCA CTTACCCAAT GCCGATGAAA TTATTGAAAA AGTCCAAGCT GAGTATGAAT TACTCAAACT GCACTTAATG AATTACTACC AAGCGAAGAA AACCTTGCTT GAGGCCAAGC GTAAACAACT TGTCGATCAG CAGCTATTGC AGCAAGTTGA AGAGCTAAAA GCGCGTTTCT TAGTCCAGCA AAAACATTGG CGAAGCCTAA CCGCAACTTA TAGCTAA
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Protein sequence | MKKPPIIWLN VSLFAITFLS AVILVPWRGI VHGYGASEWI AFIVLAFASG LSITAGYHRL WSHKAYKAHP AVRFMYALGG ALALQNSALH WASDHRIHHK HVDDNDKDPY SAKMGFWYSH IGWMLREYQS QRYHDYQNVR DLQNDRIVMW QHKHYLALVL LMNIGLPALL GWLNGDVLSM LLMAGLLRLV VVHHCTFFIN SLAHVWGSQP YTDKNTARDN GFLAMLTYGE GYHNFHHIFE NDYRNGIKWW HYDPTKWLIK SLSWLGLAKD LRTSPQERIE SARLQMQLLR TKNKVVHLPN ADEIIEKVQA EYELLKLHLM NYYQAKKTLL EAKRKQLVDQ QLLQQVEELK ARFLVQQKHW RSLTATYS
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