| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0168 |
|---|
| Symbol | |
|---|
| ID | 5371678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 206754 |
|---|
| End bp | 207566 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640828356 |
|---|
| Product | 3'(2'),5'-bisphosphate nucleotidase |
|---|
| Protein accession | YP_001364402 |
|---|
| Protein GI | 152998721 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1218] 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase |
|---|
| TIGRFAM ID | [TIGR01331] 3'(2'),5'-bisphosphate nucleotidase, bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCAG AAGAGTTGAT CGACGAAGTT ATTGCGATTG CGACCGATGC CGGGATAACT
ATCCGTGACA TTTATCTCAA AGGTAATTTT GAGCGAGAAA TGAAGTCTGA CAATACCCCT
GTCACTTCCG CAGATTTAGC GGCGAACAAG ATCATTTGTG ATCGATTAAC TGGTTTAACG
CCTGATATTC CTGTGTTATC TGAAGAGGCG GCCGACATTC CGCTGAGCGT GCGTGAATCT
TGGAAGCGCT ATTGGTTGGT CGATCCACTC GATGGCACGG GTGAGTTTAT TGCCGGTAGT
GGTGATTTTT CAGTGATTAT TGCACTCGTT GAGCACAATC GTCCTGTAAT GGGCGTGGTG
TATGTGCCTA TGACGCAAGT GTGTTATTAC GCGATTGCAG GTTTAGGGGC ATACAAACGC
ACGGACAAAC AGGAAGTGCG GATCAGCAGT CGCCAAATCG AGCACCGTGA AAAGGTCTCC
CTAAGATTGG CCGTGAGTCG CCGTCAGGAT CCTCAATCTG TATTGACCCT GTTCAACCAC
CCTAAACATT GCGAGCTCGT GGTGATGGGC GGCGCAGCGT TAAAGAGTTG TCTTGTCGCC
GAAGGTCGAG CCGATTGTTA TGTGCGAGTT GGCCCAACGG GCGAGTGGGA TACGGGAGCG
GCGCAAATCA TAGTCGAGGA AGCGGGTGGA CAGCTGATGG ATACTGAGCT ACAACCGTTA
ACCTACAATG AGCGCGAGAC GTTAGAAAAC CCTAACTTTA TCGTAGTGGG CGCACCCAAC
TTAGAGTGGG ATAAGATTTT AATAGGCGAA TGA
|
|---|
| Protein sequence | MKPEELIDEV IAIATDAGIT IRDIYLKGNF EREMKSDNTP VTSADLAANK IICDRLTGLT
PDIPVLSEEA ADIPLSVRES WKRYWLVDPL DGTGEFIAGS GDFSVIIALV EHNRPVMGVV
YVPMTQVCYY AIAGLGAYKR TDKQEVRISS RQIEHREKVS LRLAVSRRQD PQSVLTLFNH
PKHCELVVMG GAALKSCLVA EGRADCYVRV GPTGEWDTGA AQIIVEEAGG QLMDTELQPL
TYNERETLEN PNFIVVGAPN LEWDKILIGE
|
|---|
| |