Gene Shew185_0153 details

Gene Information

• Locus tag: Shew185_0153
• ID: 5370559
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: +
• Start bp: 183386
• End bp: 183961
• Gene Length: 576 bp
• Protein Length: 191 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640828341
• Product: general secretion pathway protein H
• Protein accession: YP_001364387
• Protein GI: 152998706
• TIGRFAM ID: [TIGR01708] general secretion pathway protein H; [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 40
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTAAAGC TGCGCCACGC TGGTTTCACC TTAATGGAGG TGATGCTAGT GATCTTGTTG 
ATGGGACTCA CGGCAGCGGC TGTGACTATG TCTATCGGCA ATTCGGGCCC ACAACAGGCC 
CTAGATAGAA CGGCGCGGCA GTTTATCGCT GCCACTGAAA TGGTGCTCGA TGAGACCGTT 
TTGAGTGGCC AATTTATTGG GATTGTGATT GAGAAAACCA GTTATCAGTT TGTTTTTTAT 
AAAGACGGTA AGTGGGAGCC TTTGGATAAA GACAGGCTCT TGTCTGAAAA GCAGATGGAG 
CCGGGTGTCG TGATGAACTT AGTGCTCGAT GGTTTGCCCT TGGTACAAGA CGATGAAGAA 
GACGATTCTT GGTTTGAAGA ACCACTAATT GAGCCCTCTG CCGATGACAA GAAGAAACAT 
CCTGAGCCAC AGGTCATGCT ATTCCCGAGC GGCGAGATGA GCGCTTTTGA GCTGACGTTT 
ATCGCCAAAA CTGACAAAGG TCAGCAGGCC GAAGCGTTAG TGGTCGGCGA TGCGCTGGGC 
AGATTAACCA TAGGGCGCCC CGATGAAACG CGTTAA 

 

Protein sequence

MLKLRHAGFT LMEVMLVILL MGLTAAAVTM SIGNSGPQQA LDRTARQFIA ATEMVLDETV 
LSGQFIGIVI EKTSYQFVFY KDGKWEPLDK DRLLSEKQME PGVVMNLVLD GLPLVQDDEE 
DDSWFEEPLI EPSADDKKKH PEPQVMLFPS GEMSAFELTF IAKTDKGQQA EALVVGDALG 
RLTIGRPDET R