| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0150 |
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| Symbol | |
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| ID | 5371177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 180094 |
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| End bp | 181659 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640828338 |
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| Product | general secretory pathway protein E |
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| Protein accession | YP_001364384 |
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| Protein GI | 152998703 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAA TACAATTATC CCAAGTCGAT GACCTCAGCC AAGTCTCCAA TGAGCTAGGT
CTGGAAGCTG AAGGTGATGA GGTGTTTCGT TCGAGCAGTA AAGAGCGTTT ACCCTTTGCC
TTTGCCCATC GCCACGATGT GGTGCTTGCG CCGGGTGAAA CGGGCGAGTT GAGCTTGTTT
TATACCAGCA AAACACCGTT AACGGCCATG CTCGAAGCAC GGCGCTATTC GGGTGTCGAT
TTGCCTTTGG TTAAGCTCGA AGTCGCGAAG TTTGAGGCCA AACTCACTCA AGCGTATCAG
GCGAACTCGT CTGAAGCGCA GCAGTTGATG GAAGATATCG GCAACGAGAT GGATTTATTC
ACCCTTGCCG AAGAGCTGCC GCAGACCGAA GACTTGCTCG AAGGTGATGA TGACGCGCCT
ATCATCAAAC TGATTAATGC CTTGTTATCT GAAGCGATTA AAGAAGAAGC CTCGGATATC
CACATCGAAA CCTACGAGAA ACAGCTCGTC GTGCGTTTCC GTATCGATGG TGTACTCAAG
GAAGTCCTCA AGCCAAACCG TAAGTTGTCG TCGCTATTAG TGTCGCGGAT TAAGGTGATG
GCGCGCCTCG ATATCGCCGA AAAACGTGTG CCACAGGATG GCCGTATTTC ACTGCGTATT
GCAGGTCGTG CCGTGGATGT GCGGGTATCG ACTATGCCAT CGAGCCACGG CGAGCGTGTT
GTGCTGCGTC TGCTGGATAA AAATACCGGT AACCTCGATT TAGAGCAATT GGGGATGACC
GACGGTATTC GGGTTAAGTT TGAAGATCTT ATTCGTCGCC CCCACGGCAT CATTCTGGTC
ACCGGCCCAA CGGGTTCGGG TAAAAGTACC ACCTTGTATG CGGGTCTGAC TGAGATCAAC
TCAAAAGACA CCAACATTCT TACCGTGGAA GACCCAATCG AATACGAGCT AGACGGTATC
GGTCAAACCC AAGTTAACAC TAAGGCTGAC ATGACCTTCG CCCGTGGTCT GCGCGCAATT
TTGCGTCAAG ATCCCGATGT GGTGATGATA GGTGAAATCC GTGACTTGGA AACCGCACAA
ATTGCGGTGC AAGCATCACT CACTGGTCAC ATGGTAATTT CAACCCTGCA TACCAACACA
GCGTCTGGCG CGATAACGCG TCTGCAAGAC ATGGGCGTTG AGCCATTCCT CGTATCATCG
AGTTTGCTGG GCGTGTTGGC GCAACGTTTA ATCCGTACTC TTTGTCCAAA ATGTAAAATC
GAGCACGTGC CCGATGCGCG TGAGCGTGAG TTACTGGGCA TAGCAGCCGA TGACGACAGG
CGTATTTTTC GTGCCAATGG CTGTAAATCC TGTGGTAACA ATGGCTACCG TGGTCGAACG
GGTATTCATG AGTTATTGCT GGTTGACGAC AATGTCCGCG AATTGATCCA TGGTGGCCGC
GGTGAGTTAG CTATAGAAAA GTATATCCGT CAGTTTGTGC CGAGCATTCG TCACGATGGC
ATGAGCAAAG TGCTCGCGGG CATCACCACT CTCGAAGAAG TGCTACGTGT GACTCGCGAG
GAGTAA
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| Protein sequence | MSEIQLSQVD DLSQVSNELG LEAEGDEVFR SSSKERLPFA FAHRHDVVLA PGETGELSLF
YTSKTPLTAM LEARRYSGVD LPLVKLEVAK FEAKLTQAYQ ANSSEAQQLM EDIGNEMDLF
TLAEELPQTE DLLEGDDDAP IIKLINALLS EAIKEEASDI HIETYEKQLV VRFRIDGVLK
EVLKPNRKLS SLLVSRIKVM ARLDIAEKRV PQDGRISLRI AGRAVDVRVS TMPSSHGERV
VLRLLDKNTG NLDLEQLGMT DGIRVKFEDL IRRPHGIILV TGPTGSGKST TLYAGLTEIN
SKDTNILTVE DPIEYELDGI GQTQVNTKAD MTFARGLRAI LRQDPDVVMI GEIRDLETAQ
IAVQASLTGH MVISTLHTNT ASGAITRLQD MGVEPFLVSS SLLGVLAQRL IRTLCPKCKI
EHVPDARERE LLGIAADDDR RIFRANGCKS CGNNGYRGRT GIHELLLVDD NVRELIHGGR
GELAIEKYIR QFVPSIRHDG MSKVLAGITT LEEVLRVTRE E
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