Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0142 |
Symbol | |
ID | 5373544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 168269 |
End bp | 170320 |
Gene Length | 2052 bp |
Protein Length | 683 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640828330 |
Product | peptidase M14 carboxypeptidase A |
Protein accession | YP_001364376 |
Protein GI | 152998695 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2866] Predicted carboxypeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCTTAT TTTCCCTCTC CGTTATCGCC ATTGCCTGCC TTTCTGCGGG CAGTCTCTAC TCAGTCGATG CTGTTGCCAA CGAGGCAAAA ACCTTAGCCA AAACAGCTCA AGCATCTACA GATTTGCCGA CCTCGACTCC AGTCGCTGCG GCGCAAACCG TCACCGACAA AACGCCAGCT GAAACCCCAG CAACAGCGCC ACAGGATGTA AGCCCTGCTG CGAATACCCA AGCAACCGAA CCCGCTGCGA CTGTCGCAAC CGATGCCACC ACTGTAGCGC CAGAGCCCGC GCCGATCCCT GAGCGAGCCA ACACCTTTGT CAACGATGCC ATTTTACCGC CGAGTATCAC TTGGCATGGC GCCAGCGAAT CGCTCATGTT GAGTGTCGAT AACGAGTGGG CGACGCCGTT TGAACAAAGT AGTGGTATTG AAAGTCCGAG CTACGAGGCC ACTATCGCTT GGCTCGACAC GCTTGCGGGC GAAACCGATA AATTACAAAA GGTGAGCTTA GGCAAGAGCC CACAGGGGCG CGATATTTGG ATGTACATCG CCAGCAGTGA AGGCATTAAT GAGTCGGCAC GCCTCAAGCA AAACACTAAG CCAACGGTTT TAGTGCAAGC AGGGATTCAT GCCGGAGAAA TTGACGGTAA AGATGCCGGC ATGATGCTGC TACGTGACAT CGTTAAAGGC GATAAAAGCG CCCTGCTGGA TAAAGCCAAC CTCTTGTTTG TGCCTATGTT TAGTGTCGAT GCCCATGAGC GCAGCGGCGA ATTTAATCGC GTGAATCAAC GTGGCCCTGT GAATATGGGC TGGCGCACTA CGGCAAATAA TCTTAACCTT AACCGCGATT ATGCCAAGGC CGATACCTTA GAAATGCAGC ACATGCTGCG CGCAATCAAC GTGTGGCAGC CAGACTTGTA TATCGACGTG CATGTCACCG ACGGCATAGA TTATCAATAC GATGTCACCT TTGGTTATAA CCTTGCCCAA GGGTTAAGCC CAGCCAGTTA CCGCTGGCTC GAAAACAGCT ACAGACCCGC AGTTGAAGCG GCATTAACCG AGCAAGGCCA TATTCCCGGC CCGCTGATTT TTGCCGTGGA TAACGCCGAT ATCACCAAAG GCATGTCGCT GTGGAATCCA AGTCCGCGCT TCTCTAACGG TTATGGCGAT GCCCGCCATT TACCGACTAT TTTGATTGAA AACCACAGCT TAAAACCCTT TAAACAAAGA GTGCTCGGCA CCTATGTGAT GCTGGAGCAA ACCCTCAAAA CCGTGGGCGA ACAGGCGACT AAACTGAAGA GTGCGATTCA GGAAGATAAA TACCGCGCCT CACCGCTGAT CACCCTCACG TGGAAATCGG CGCCGCTGGC AAAAGGTTGG GACTTTAAGG GCATCGACTA TCAACTCGAA AAGAGCCCCA TCAGTGGCAC TGAGGTGGTG CGATGGAACG GTCAACCTAA GCTGTACCCC AACTTGCCCG TGATCGCCGA GACTGTGCCA GATATTAAAG TCACTCGTCC GAGCGCTTAC TATATTCCGG CGCAATGGAC GCAAGTGATT GATCGCCTGA ACATACATGG CATCCGCATG ACGCGCCTGA CCAAACCGAC AGAGCTTAAA TTACAGCAAT ACAAACTCAG TAACCCAGTG TTTAACACTA AGGATTTTGA GGGCCATCAA ACGGTCAAAG CCGAGTCAGA GTTGACGAAA GTCAGCACCA CTCTGCCCGC TGGCACCATT AAAATCAGCA CAGATCAACC GCTGGGCGAT CTGGCGGTTT TACTGCTGGA GCCGCAATCA CCAGATTCCT TGCTGCAATG GGGTTTCTTT AATCCTATCT TCACCCGCAC TGAATACATT GAAGATTATG CGGTTGAGCC GCTGGCGGCC AAGATGCTAA AAGATGATCC TAAGCTGCAA GCTGAGTTCG ACAAAGCACT GACCAACGCC GAATTTGCCG CCGATCCCGA GGCACGCCTG CGCTGGTTCT ATGAACGCAG CCCTTACTAC GATAACCGTT ACCTTAAGTA TCCGGTTTAC CGTAGTCGTT AA
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Protein sequence | MRLFSLSVIA IACLSAGSLY SVDAVANEAK TLAKTAQAST DLPTSTPVAA AQTVTDKTPA ETPATAPQDV SPAANTQATE PAATVATDAT TVAPEPAPIP ERANTFVNDA ILPPSITWHG ASESLMLSVD NEWATPFEQS SGIESPSYEA TIAWLDTLAG ETDKLQKVSL GKSPQGRDIW MYIASSEGIN ESARLKQNTK PTVLVQAGIH AGEIDGKDAG MMLLRDIVKG DKSALLDKAN LLFVPMFSVD AHERSGEFNR VNQRGPVNMG WRTTANNLNL NRDYAKADTL EMQHMLRAIN VWQPDLYIDV HVTDGIDYQY DVTFGYNLAQ GLSPASYRWL ENSYRPAVEA ALTEQGHIPG PLIFAVDNAD ITKGMSLWNP SPRFSNGYGD ARHLPTILIE NHSLKPFKQR VLGTYVMLEQ TLKTVGEQAT KLKSAIQEDK YRASPLITLT WKSAPLAKGW DFKGIDYQLE KSPISGTEVV RWNGQPKLYP NLPVIAETVP DIKVTRPSAY YIPAQWTQVI DRLNIHGIRM TRLTKPTELK LQQYKLSNPV FNTKDFEGHQ TVKAESELTK VSTTLPAGTI KISTDQPLGD LAVLLLEPQS PDSLLQWGFF NPIFTRTEYI EDYAVEPLAA KMLKDDPKLQ AEFDKALTNA EFAADPEARL RWFYERSPYY DNRYLKYPVY RSR
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