Gene Shew185_0093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0093 
Symbol 
ID5371395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp113890 
End bp114450 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content49% 
IMG OID640828281 
ProductMarR family transcriptional regulator 
Protein accessionYP_001364328 
Protein GI152998647 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTCAT TGTCACTCAG TGAAACTTTG CACAGATTAG TGCATGCCTA CAAAAAGCAA 
TTGCGTAGCG ATATTGCTGC ACAAGAGATT GATTTACCTG TCACTCATAT CCGTGCCTTG
AAGGGCGTGT GTCGCAACCC TGAATCGACG GCCCAGTCTA TCGCCCTGCG AATGCAGCGG
GATAAAGCGC AAATTACCCG TGTTCTTAAT GAGTTACAGC AGGGTGGGTT GATCACTAAA
ATCGATAACC CTAAGGATGG CCGCAGCCAG TTACTGCGAC CCACGGCAGA GGGGGAAAAG
ATCATGACCC AGATCAGTGC CTCAGAACGT AAAACCGTGG CGCGCATGAC GCAGGCGCTG
AGCTCAGCAG AAGTCGACAC CTTTATTAAA CTTGCCAATC GAATCAGCAA AAGTGTGGAT
GAGGCCGCTG CCGCTAAAAG CGGTGCGGAT TGCCATGCTC AAAAAAGACC ATCTAGTAAG
CCAAAAGACC CGATTGGCAA AGGAGCCGTT GAGGCACGCT TAATGGAAGA ACACGCCATA
GGAGAAAATC ATAATGAATA A
 
Protein sequence
MPSLSLSETL HRLVHAYKKQ LRSDIAAQEI DLPVTHIRAL KGVCRNPEST AQSIALRMQR 
DKAQITRVLN ELQQGGLITK IDNPKDGRSQ LLRPTAEGEK IMTQISASER KTVARMTQAL
SSAEVDTFIK LANRISKSVD EAAAAKSGAD CHAQKRPSSK PKDPIGKGAV EARLMEEHAI
GENHNE