| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0070 |
|---|
| Symbol | |
|---|
| ID | 5373232 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 90559 |
|---|
| End bp | 91293 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640828259 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001364306 |
|---|
| Protein GI | 152998625 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4555] ABC-type Na+ transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 54 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAAG TATCCAATCT TTCCAAGCGT ATCGGTGACG TACAGGCGCT CAATGACTTA
AGCTTCGTCG CACAAAACGG CCAAATAACA GGATTGCTCG GCCCCAACGG CGCGGGTAAA
ACTACCTGTT TACGCACGAT TTTTGGCTTG CTGAAACCCG ATAACGGCAA AGCAGAAATC
GAAGGGATAG ATGTCGCCAT CGACCCTATC GGCGCTAAAC AGCAACTCGG ATTATTCCCC
GACCCTTTTG GTCTGTACGA ACGCTTAACG CCACGGGAAT ACATTCGTTA TTTTGCCGAG
CTAAGCGGCT TATCCTCTAA GGATGCCAAG GAGGCCACCA GCCAAGTGAT TGCGAAATTA
CGTCTAGAAG ACATTAGCGA TCGCCGCTGC AAGGGGTTCT CCCAAGGCCA AAGGATGAAA
ACCGCCCTCG CACAAGCCAT AGTCCACAGC CCGAGCAATA TTATCCTCGA CGAACCAACC
CGTGGACTCG ATGTGATGAG CACTCGCCTG CTGCGTGACA TTCTTATCGA TCTTAAAAAT
CAAGGACATT GCGTGCTGTT CTCTAGCCAT GTGATGCAAG AAGTCGCCGC ACTGTGTGAC
CAAGTGATTG TCATGGCCCA GGGCAGAGTC GTCGCCATTG GTAGCCCAAC TGAACTGTGC
ACCCAAACGG GTAAGGACTC GCTCGAAGAA GCCTTTATTC AACTGATCGG CACAGATGAA
GGGATAGCAG CATGA
|
|---|
| Protein sequence | MIKVSNLSKR IGDVQALNDL SFVAQNGQIT GLLGPNGAGK TTCLRTIFGL LKPDNGKAEI
EGIDVAIDPI GAKQQLGLFP DPFGLYERLT PREYIRYFAE LSGLSSKDAK EATSQVIAKL
RLEDISDRRC KGFSQGQRMK TALAQAIVHS PSNIILDEPT RGLDVMSTRL LRDILIDLKN
QGHCVLFSSH VMQEVAALCD QVIVMAQGRV VAIGSPTELC TQTGKDSLEE AFIQLIGTDE
GIAA
|
|---|
| |