Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0069 |
Symbol | |
ID | 5373231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 89325 |
End bp | 90464 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640828258 |
Product | transport protein, putative |
Protein accession | YP_001364305 |
Protein GI | 152998624 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG1668] ABC-type Na+ efflux pump, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAA TAATGGCTAT GGTTCGTAAA GAACTCATCG ACGCCGCCCG CGATAAGCGC TCTGTGATGG CGGGGCTTTA CTACGCCATC GGCACGCCAC TGATCATGTG CGGCCTATTT ATGGTGTTAA TTGGCCAATT AACGAGTCCA GACGATCTAA AAATCACTAT CACCAATCCC GATAAAGCAC CGGATTTAGT TCGCTTTTTA TCGAATAAAG GCATCAGCAG CGGTGAAGTG AAGGACAGTG AGCTTAAAGC CATAGAGCTT ATCATCAGCC CCGACTATGC CGCGCAGATG AATCAAGGCA AAGGCGCCGA GATCACGATT GTTGCCGATA ATTCCGATGA AAAACTGCAA AACTCAATTC GAAGACTCGA GAAGCAACTG CAGTCCTACA GCACAGAAAT GGGCAGCCTA CGACTGATTG CCCGCGGTAT CGATCCTCGT GTGATGCAGC CACTGAAGGT CAGTGTCCAC GACCAAGCGA CAACAGATTC GAAGGGCGGG ATGATCTTAG GTATCGCGAT TTTCACTATG ATTTACTCGG TATTTATCTC GGGCATGAAC CTCGCCATAG ATACCAGCGC GGGTGAACGC GAACGTAACT CGCTAGCTCT GTTACTCAGT CATCCATTGA CCACACGCCA ATTAGTGCTG TCGAAAATCA TCGCAGTGAG TCTGTTTGCC CTCTTAGGCT TAGTGCTGAT TTTGCTGGTA TCTAAAGTCG CCTACACCTT TGTACCTTGG CAGGAGTTGG GCTTTAGCGT CAACATCACC ACAGAATTTA TGGCGCTGAT GTTAGTGGTC GGTATCCCGG TTGCGTTAAT GGCCGCTTGC CTGCAATTGT TTGTGTCTTT TATGGCGAAA ACCTTTAAGG AAGCACAATC CTACCTGACT ATGGTGCTGT TTGTGCCCTT AGCCTTGTCG ATGGCCGCCA GCTACAACAT AGCGCCAGAT ATGCTGCAGT GGCTGCCGGT CTCGGGTCAG CAACAAGCAT TAATGGACTT TATCAAAGGT AAAGACTTGC CCATGTTGCA ATTATTCGTT TCGACCTTAG GCACACTCGC CATTGCGGTA TTACTGGCGT TTGGCATGGA AAGATCGCTC AAGAGTGAAA AAGTGATCTT CGGTTTGTAG
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Protein sequence | MNKIMAMVRK ELIDAARDKR SVMAGLYYAI GTPLIMCGLF MVLIGQLTSP DDLKITITNP DKAPDLVRFL SNKGISSGEV KDSELKAIEL IISPDYAAQM NQGKGAEITI VADNSDEKLQ NSIRRLEKQL QSYSTEMGSL RLIARGIDPR VMQPLKVSVH DQATTDSKGG MILGIAIFTM IYSVFISGMN LAIDTSAGER ERNSLALLLS HPLTTRQLVL SKIIAVSLFA LLGLVLILLV SKVAYTFVPW QELGFSVNIT TEFMALMLVV GIPVALMAAC LQLFVSFMAK TFKEAQSYLT MVLFVPLALS MAASYNIAPD MLQWLPVSGQ QQALMDFIKG KDLPMLQLFV STLGTLAIAV LLAFGMERSL KSEKVIFGL
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