| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0023 |
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| Symbol | |
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| ID | 5371279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 28560 |
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| End bp | 30002 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640828208 |
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| Product | TrkH family potassium uptake protein |
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| Protein accession | YP_001364259 |
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| Protein GI | 152998578 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.991161 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAACT TTAGACCACT ATTGTTTATT TTAGGGCTGT TTTTGTCCAT GCTGACAGCC
TTCATGTTGA TCCCACTGCT CCTCGCCGTG TTCAATGCCG AGGAAACCGT GGGCTCTTTC
ATGCTGTCGG CGTTAGTGAC AGGCATTAGT GCCAGCTTGT GTTTACACAA TGGCCAGAGC
AAGACTATTA ACCTCAATAT CCGCGATATG TTCCTGCTGA CCAGCCTAAC GTGGTTGATC
GTAAGCCTGT TTGCCGCCAT GCCCTTTACC CTATATCACG GGATTGGCTA TACCGACGCC
TTCTTTGAGA CTATGTCCGG CATCACGACC ACAGGTTCTA CTGTGCTCTC GGGGTTGGAT
ACCATGGATC ACAGCATTTT AATCTGGCGT TCTTTATTGC AGTGGCTAGG TGGGATTGGC
TTTATCGTGA TGGCGGTGGC CATTCTGCCC TTCTTGAACG TCGGTGGTAT GCGGCTGTTC
CGCACTGAAT CTTCGGATTG GAGCGATAAA GCCGTACCAC GCACCCAGAG CATGGCTAAG
TACTTATTCT TTATTTATAT TTTGCTGACT GTTGCCTGCT GCGTTGCCTA TCATCTGGCG
GGGATGACTT GGTTTCAAGC CATCAACCAT GCCATGACCA CCCTATCAAC CGGCGGCTAC
TCAACATCTG ATAGCTCAAT GGCCGCGTTC TCCCACTCGG CTCACTGGGT TGGCGTGTTC
TTTATGGCGG CGGGTGGCTT ACCGCTACTC ATGTTTGTGC ACACCATACA GCAAAGGGAT
CTGCGGATTT GGAACGATGC TCAGGTCAAA GGTTTCTTGT TTTTCCTGAC CTTCGTGTCT
TGTTCTATTG GCTTTTGGCT GTGGCAAACC CGCGATATTG AACTCCTCGA TGCACTGCGT
TTATCCAGCT TTAACGTGGT TTCTGTGGTG ACCACTACAG GTTATGGCTT AACGGATTAC
GGTGCTTGGG GCGCCTTTGC CAACATCGCC TTTATGTTCT TAATGTTTGT CGGTAGCTGC
TCTGGCTCAA CTTCTGGCGG GATTAAAATC TTCCGTTTTC AAATCGCTGG CGCCATTATG
CGTGAGCAAT TGAAACAGCA ATGTCATCCA AACGGTATCT TTAGGGAACG CTACAACAAT
CGCATCATCA GTGAAGATAT CGTGCGCTCG CTGATCACTT TCGTGCTGTT GTTTGTAATG
GTGATTGTAG GCTTGTCGGT AATTTTAGTG CTCACAGGGC TCGATCCTAT GACCAGTTTC
ACGGGCGCTA TCACGGCGGT CACGAACGTA GGTCCTGGCT TAGGGCCGAT TATTGGCCCT
GCGGGTAACT TCTCAACCCT GCCCGATGTG GCGAAATGGG CGTTGTCACT CGGCATGCTC
CTCGGTCGTT TAGAAATTCT GACCGTAGCA GTGTTATTCC ACCCGAGTTT CTGGAAGTAT
TAA
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| Protein sequence | MLNFRPLLFI LGLFLSMLTA FMLIPLLLAV FNAEETVGSF MLSALVTGIS ASLCLHNGQS
KTINLNIRDM FLLTSLTWLI VSLFAAMPFT LYHGIGYTDA FFETMSGITT TGSTVLSGLD
TMDHSILIWR SLLQWLGGIG FIVMAVAILP FLNVGGMRLF RTESSDWSDK AVPRTQSMAK
YLFFIYILLT VACCVAYHLA GMTWFQAINH AMTTLSTGGY STSDSSMAAF SHSAHWVGVF
FMAAGGLPLL MFVHTIQQRD LRIWNDAQVK GFLFFLTFVS CSIGFWLWQT RDIELLDALR
LSSFNVVSVV TTTGYGLTDY GAWGAFANIA FMFLMFVGSC SGSTSGGIKI FRFQIAGAIM
REQLKQQCHP NGIFRERYNN RIISEDIVRS LITFVLLFVM VIVGLSVILV LTGLDPMTSF
TGAITAVTNV GPGLGPIIGP AGNFSTLPDV AKWALSLGML LGRLEILTVA VLFHPSFWKY
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