| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0016 |
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| Symbol | fadB |
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| ID | 5372577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 20698 |
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| End bp | 22848 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640828201 |
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| Product | multifunctional fatty acid oxidation complex subunit alpha |
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| Protein accession | YP_001364252 |
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| Protein GI | 152998571 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02437] fatty oxidation complex, alpha subunit FadB |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.283529 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCTACC AAAGTCCTAC AATTCAGGTT GAGTTACTCG AGGATAATAT TGCCAAGCTG
TGCTTTAACG CACCCGGTTC GGTGAACAAA TTCGACAGAG AAACCCTCGC CTCGCTCGAT
GCGGCATTAG ACAGCATCAA GCAAGATTCC AATATCAAAG CGTTAGTGCT GACCTCAAGT
AAAGATACCT TTATTGTGGG CGCCGACATT ACCGAATTTT TAGGCCTGTT CGCACAAGAT
GACGCCGTAT TGCTCTCTTG GGTTGAACAA GCTAACGCAG TCTTCAACAA ACTCGAAGAC
TTGCCTTTCC CAACTGCATC AGCAATCAAA GGCTTTGCCT TAGGTGGCGG CTGTGAAACC
ATTCTGGCAA CCGATTTCCG TATCGCAGAC ACCACAGCCA AAATCGGTTT ACCTGAAACT
AAACTCGGCA TCATCCCAGG TTTTGGCGGC ACAGTTCGTC TGCCACGTGT GATTGGTGCA
GATAACGCAC TTGAGTGGAT CACGACCGGT AAAGACCAAC GCGCTGAAGA TGCACTGAAA
GTCGGCGCTG TTGATTCCGT GGTTGCACCA CAAGCGTTAG AAGCTGCTGC GATTCAAATG
CTGAAAGATG CTGTTGCTGA AAAGCTGGAT TGGCAAGCAC GTCGTAACCG TAAACTGTCT
GCGCTAACAC TGCCAAAACT TGAAGCTATG ATGTCATTCA CCACAGCCAA AGGCATGGTG
TTTGCGGTTG CGGGTAAACA CTACCCTGCA CCAATGGCTG CTGTAAGCGT AATTGAGCAA
GCATCGACTA AAGGTCGTGC TGAAGCATTA CAAATCGAAC ATCAAGCCTT TATCAAGCTG
GCTAAAACTG ACGTAGCTAA AGCACTTATC GGTATTTTCC TTAATGATCA ATTTGTTAAA
GGTAAAGCGA AGAAAGCCGG CAAGTTAGCG AAAGAAGTCA ACAACGCGGC CGTATTAGGC
GCAGGCATTA TGGGCGGCGG CATCGCTTAC CAAAGCGCCA GCAAAGGCAC ACCGATTGTC
ATGAAAGACA TTGCCCAGCC AGCATTAGAT TTAGGCCTCA ATGAAGCCGC TAAACTGCTA
TCTGCCCAAG TCGCCCGTGG CCGTTCAACG CCAGAAAAAA TGGCCAAAGT GCTGAACAAC
ATCACGCCTT CATTAGATTA TGCCGCGATT AAACACAGTG ATGTCGTCGT TGAAGCCGTT
GTTGAACATC CAAAAATCAA AGCACAGGTT TTAGCCGAAG TTGAAGGCTA TGTGAGTGAA
GATGCAATTA TCGCGTCAAA CACTTCAACG ATTTCAATCA ACTTGCTCGC TAAGAGCATG
AAGAAACCTG AACGTTTCTG CGGTATGCAT TTCTTCAACC CAGTGCACAA AATGCCTTTG
GTCGAAGTTA TCCGTGGCGA GCATAGCTCT GAAGAAACCA TCGCCTCTGT TGTGGCTTAT
GCCAGCAAAA TGGGCAAGAC CCCAATCGTT GTTAATGATT GCCCTGGCTT CTTCGTTAAC
CGCGTACTCT TCCCTTACTT TGCAGGCTTT AACGGCTTAC TTGCCGAAGG TGGCGACTTT
GCTGCAATCG ACAAAGTGAT GGAAAAACAA TTCGGTTGGC CAATGGGTCC AGCTTACCTG
CTCGACGTAG TCGGTTTAGA CACAGGTCAT CACGCCCAAG CTGTTATGGC TGAAGGTTTC
CCTGATCGCA TGGGTAAATC AGGCACTGAC GCGATTGATG TGATGTTTGA GAACAAACGT
CTTGGCCAGA AAAATGGTAA AGGTTTCTAT GTCTATTCAG TCGATAGCCG TGGCAAGCCG
AAGAAAGATG TCGATCCAAC GAGCTACGGC CTATTGAAAG ATGCCTTTGG CGAGTTAAAA
GCCTTTGAAG CCGATGACAT TATTGCCCGT ACTATGATCC CTATGATCAT CGAAACCGTG
CGCTGTTTAG AAGAAGGTAT TGTCGCATCG CCTGCCGAAG CGGATATGGG CCTAGTTTAT
GGCTTAGGTT TCCCGCCATT CAGAGGCGGC GTGTTCCGTT ACTTGGATAC CATGGGTGTC
GCAAATTTTG TGGCCTTAGC AGACAAATAT GCTCACTTGG GCGGTCTGTA TCAAGTCACA
GATGCGATGC GCACATTAGC AGCCAATAAC GGTAGCTACT ACCAAGCCTA A
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| Protein sequence | MIYQSPTIQV ELLEDNIAKL CFNAPGSVNK FDRETLASLD AALDSIKQDS NIKALVLTSS
KDTFIVGADI TEFLGLFAQD DAVLLSWVEQ ANAVFNKLED LPFPTASAIK GFALGGGCET
ILATDFRIAD TTAKIGLPET KLGIIPGFGG TVRLPRVIGA DNALEWITTG KDQRAEDALK
VGAVDSVVAP QALEAAAIQM LKDAVAEKLD WQARRNRKLS ALTLPKLEAM MSFTTAKGMV
FAVAGKHYPA PMAAVSVIEQ ASTKGRAEAL QIEHQAFIKL AKTDVAKALI GIFLNDQFVK
GKAKKAGKLA KEVNNAAVLG AGIMGGGIAY QSASKGTPIV MKDIAQPALD LGLNEAAKLL
SAQVARGRST PEKMAKVLNN ITPSLDYAAI KHSDVVVEAV VEHPKIKAQV LAEVEGYVSE
DAIIASNTST ISINLLAKSM KKPERFCGMH FFNPVHKMPL VEVIRGEHSS EETIASVVAY
ASKMGKTPIV VNDCPGFFVN RVLFPYFAGF NGLLAEGGDF AAIDKVMEKQ FGWPMGPAYL
LDVVGLDTGH HAQAVMAEGF PDRMGKSGTD AIDVMFENKR LGQKNGKGFY VYSVDSRGKP
KKDVDPTSYG LLKDAFGELK AFEADDIIAR TMIPMIIETV RCLEEGIVAS PAEADMGLVY
GLGFPPFRGG VFRYLDTMGV ANFVALADKY AHLGGLYQVT DAMRTLAANN GSYYQA
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