| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0015 |
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| Symbol | fadA |
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| ID | 5373382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 19512 |
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| End bp | 20675 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640828200 |
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| Product | 3-ketoacyl-CoA thiolase |
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| Protein accession | YP_001364251 |
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| Protein GI | 152998570 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02445] fatty oxidation complex, beta subunit FadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACAAG CTGTTATCGT AGACTGCATC CGTACTCCGA TGGGCCGCTC AAAGGCTGGC
GTATTTCGTA ATGTGCGTGC AGAAACTCTG TCTGCCGAAT TAATGAAAGG TCTGTTGCTG
CGTAACCCGC AACTCGACCC AAACCTGATT GAAGACGTGA TTTGGGGTTG TGTGCAACAA
ACCCTAGAGC AAGGCTTCAA CATCGCCCGT AACGCTTCGC TATTAGCGGG CATTCCAAAG
ACCGCTGGCG CTGTGACGGT TAACCGCCTA TGTGGTTCCT CAATGGATGC TATCCATCAA
GCTGCGCGTG CGATTATGAC TGGCATGGGC GACACCTTTA TTATTGGTGG CGTAGAACAC
ATGGGCCACG TGCCAATGAG CCATGGTGTC GACTTCCACC CAGGTCTTGC TAACAACGTG
GCAAAAGCCT CTGGCATGAT GGGTTTAACG GCTGAAATGC TGGGTAAACT GCACGGTATT
ACCCGTGAAC AGCAAGATGC GTTTGCGGTA CGTTCACACC AACGCGCTTA TGCTGCGACA
GTTGAAGGCC GCTTTGCCAA GGAAATCTAT GGCATTGAAG GTCACGATGC TAACGGCGCC
TTAATTAAAG TCCTGCAAGA CGAAGTGATC CGCCCAGAAA CCACAATGGA ATCTTTGGCT
GCACTGCGTC CCGTATTTGA TCCAGTAAAC GGTACTGTGA CTGCTGGTAC TTCTTCTGCA
CTGTCTGATG GCGCTTCAGC CATGTTGATC ATGGAAGAAT CTAAAGCGCG CGCACTTGGC
TTGCCAATTC GTGCACGCAT TCGCTCCATG GCGGTTGCAG GTTGTGACGC GGCTATCATG
GGTTACGGCC CAGTGCCAGC CACGCAAAAA GCACTGGCTC GCGCTGGTAT CACAGTTGCC
GATTTAGATG TGATTGAACT TAACGAAGCG TTTGCTGCTC AGTCTTTACC TTGTGTGAAA
GATTTAGGTT TAGCAGATGT GGTTGATGAC AAAATCAACC TCAACGGCGG CGCAATTGCA
CTAGGTCACC CACTGGGTTG TTCAGGCGCT CGTATCTCTA CGACGCTGAT CAACTTAATG
GAAGACAAAG ACGCGACCTT AGGGTTAGCG ACCATGTGTA TTGGTTTAGG CCAAGGTATC
GCCACTGTAT TCGAACGCGT TTAA
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| Protein sequence | MKQAVIVDCI RTPMGRSKAG VFRNVRAETL SAELMKGLLL RNPQLDPNLI EDVIWGCVQQ
TLEQGFNIAR NASLLAGIPK TAGAVTVNRL CGSSMDAIHQ AARAIMTGMG DTFIIGGVEH
MGHVPMSHGV DFHPGLANNV AKASGMMGLT AEMLGKLHGI TREQQDAFAV RSHQRAYAAT
VEGRFAKEIY GIEGHDANGA LIKVLQDEVI RPETTMESLA ALRPVFDPVN GTVTAGTSSA
LSDGASAMLI MEESKARALG LPIRARIRSM AVAGCDAAIM GYGPVPATQK ALARAGITVA
DLDVIELNEA FAAQSLPCVK DLGLADVVDD KINLNGGAIA LGHPLGCSGA RISTTLINLM
EDKDATLGLA TMCIGLGQGI ATVFERV
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