Gene Shew185_0010 details

Gene Information

• Locus tag: Shew185_0010
• ID: 5371617
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: +
• Start bp: 12946
• End bp: 13548
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640828195
• Product: DNA-3-methyladenine glycosylase I
• Protein accession: YP_001364246
• Protein GI: 152998565
• COG category: [L] Replication, recombination and repair
• COG ID: [COG2818] 3-methyladenine DNA glycosylase
• TIGRFAM ID: [TIGR00624] DNA-3-methyladenine glycosylase I

Plasmid Coverage information

• Num covering plasmid clones: 50
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAGAGA TCCGTTGTGG CTGGGTAAGT GATGATCCCT TGTATCGTGA GTATCATGAC 
AAAGTGTGGG GGCGGCCGGT TTATGATCCT AAGGAGCTGT TTGCTAAGTT GTGTTTAGAT 
GGTCAACAGG CCGGATTATC TTGGATAACT ATCCTGAAGA AACAACAAAA TTACGAGCAG 
GCCTTTGCCA ATTTTGAACC CGAAGTGATT GCTGGCTTTG ATGAGGCGAA AGTGGTGGAG 
CTTATGTTGA ATCCCGGCAT AGTGCGTAAT CGCTTGAAGG TGAACTCTAT CATCAAGAAT 
GCCAAAGGAT ATTTGGCCTA TACTGCCGAT GGGAAGGATT TCTCTACATT CTTATGGAGC 
TTTGTTGGTG GTAAGCCCAT AGTTAATCAT TTTACTGCTA TGTCGCAGGT TCCAGCGCAA 
ACGCCGGAAT CTGAAGCCAT GTCAAAAGCG TTAAAGAAGC TTGGATTTAA TTTCGTCGGC 
CCAACAATTT GTTATGCCTT TATGCAAGCG GTGGGTATGG TGAATGATCA CCTTGTAGAG 
TGTATTTCCT ATCAGGCCTG TGTTGATTCC TGTGCAGGAA AGCATCACCG CGAACATCAG 
TAA 

 

Protein sequence

MEEIRCGWVS DDPLYREYHD KVWGRPVYDP KELFAKLCLD GQQAGLSWIT ILKKQQNYEQ 
AFANFEPEVI AGFDEAKVVE LMLNPGIVRN RLKVNSIIKN AKGYLAYTAD GKDFSTFLWS 
FVGGKPIVNH FTAMSQVPAQ TPESEAMSKA LKKLGFNFVG PTICYAFMQA VGMVNDHLVE 
CISYQACVDS CAGKHHREHQ