Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0008 |
Symbol | glyS |
ID | 5373032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 9843 |
End bp | 11912 |
Gene Length | 2070 bp |
Protein Length | 689 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640828193 |
Product | glycyl-tRNA synthetase subunit beta |
Protein accession | YP_001364244 |
Protein GI | 152998563 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTTG AAAACTTACT CATAGAGTTA GGCACAGAAG AGTTACCACC TAAGTCACTG CGTAAACTGG CTGAATCCTT TTTAGCTAAC TTTACCGAAG AACTCACCAA AGCCGATTTA GCATTTAGCT CTGCCGTTTG GTACGCAGCG CCACGTCGTC TGGCGATTAA CGTCACTGAA CTTGCGCTTG CACAAGCCGA CAAAGTAGTT GAGAAACGTG GCCCCGCCGT GAGTTCAGCC TTTGATGCTG AAGGTAAGCC GACTAAAGCC GCCGAAGGTT GGGCGCGTGG GAATGGTATT ACTGTTGAAC AAGCCGAACG TTTAGTGACA GATAAAGGCG AATGGTTAGT CCATAACGCT AAAGTTGAAG GCGTCGAAAC GAAAAGTTTG ATCGCTGCTA TGGCTCAACG TGCACTCGAT AAATTGCCCA TTCCTAAGCC AATGCGTTGG GGTAATAATA AAACCCAATT TATCCGCCCT GTTCATACAG CAACTATGTT GCTTGGCAGC GAGTTGATTG AAGGCGAATT GCTCGGTATT AAATCAGCAC GCACAGTACG TGGCCATCGC TTTATGGGCC AAGCCAGCTT TGAACTAGCA CATGCCGATC ACTACCTTGC CGACTTAAAA GAAAAAGGCA AAGTCATCGC TGATTACGAA GTGCGTAAAA CCTTGATAAA AGCCGATGCC GAAAAAGCAG CCGCGAAAAT TGGCGGTAAA GCCGATATCG AAGATAGCCT ACTTGAAGAA GTCGCCTCTT TGGTTGAATG GCCTGTGGTA CTAACTGCAA GCTTTGAAGA AAAGTTCTTG AACGTACCGT CAGAAGCTTT GGTTTACACC ATGAAAGGCG ATCAAAAGTA CTTCCCAGTC TTTGATGAAG CGGGCAAGTT ACTGCCAAAC TTTATCTTTG TGACCAACAT AGAATCTAAA GATCCTGCGC AAATTATCTC TGGTAACGAG AAAGTCGTTC GTCCACGTCT TGCCGACGCA GAATTCTTCT TTAATACCGA TAAAAAACAC ACGCTGGAAT CACGTTTACC TAGCTTAGAA ACAGTATTGT TCCAACAGCA GCTGGGTACA TTAAAAGACA AAGTAAATCG TATCTCTGCC CTAGCCGCCT TTATTGCCGA GCAAACTGGT GCGAATGCGG TTGATGCAGC CCGTGCAGGT TTGTTATCTA AAACCGATTT GATGACCAAT ATGGTGATGG AATTTACCGA CACTCAAGGC ACTATGGGCA TGCATTACGC CCGCCTCGAT GGTGAAACCG AAGCCGTTGC AGTTGCGATG GAAGAGCAAT ACAAGCCTAA GTTCTCTGGC GATACAGTGC CAAGTGCTGG CGTATCTTGC GCTGTCGCAT TAGCAGATAA GCTCGATACT TTAGTCGGTA TCTTTGGTAT TGGCCAAGCT CCTAAAGGCG CAGCCGATCC CTTTGCCCTA CGCCGCGCAG CAATTGGCGT GCTACGTATC ATAGTAGAAA ACAAGCTACC ACTTGATTTA GTTGATCTTA TTGCTAAAGC ACAAGCTCTA CATGGCACTA ACTTAAGCAA CGCCAATGCA AGCGACGAAG TGTTAGAGTT CTTAATGGCA CGCTTCCGCG CTTGGTATCA AGATAAAGGC ATTGGTGTTG ATGTGATCTT AGCCGTGCTA GCACGTCGCC CAACACGCCC AGCTGATTTT GATAGCCGTA TCAATGCGGT ATCACACTTT AGAAGCCTAG AAGCTTCTAG CGCACTTGCG GCAGCGAACA AACGTGTATC CAACATTCTG GCTAAGGTTG AAGGTGCTTT ACCAACAACC ATCAATGCGA ATCTGTTAAC TGAAGCCGCA GAGCAAGCAT TAGCGGCCAA GTTGAACGAG CTGCAACCAC TACTGGCGCC TTTGTTTGCC AATGCCGATT ACCAACAAGC CTTAACCTTG TTAGCTGGCC TACGTGAAAG CGTGGATCAG TTCTTCGAAG ATGTGATGGT AATGGCGGAT GATGAAGCGT TGAAAAACAA TCGTTTAGCA TTGTTGAATA ATCTACGCGA GCAGTTCCTG CACGTCGCGG ATATATCACT ACTGCAATAA
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Protein sequence | MNFENLLIEL GTEELPPKSL RKLAESFLAN FTEELTKADL AFSSAVWYAA PRRLAINVTE LALAQADKVV EKRGPAVSSA FDAEGKPTKA AEGWARGNGI TVEQAERLVT DKGEWLVHNA KVEGVETKSL IAAMAQRALD KLPIPKPMRW GNNKTQFIRP VHTATMLLGS ELIEGELLGI KSARTVRGHR FMGQASFELA HADHYLADLK EKGKVIADYE VRKTLIKADA EKAAAKIGGK ADIEDSLLEE VASLVEWPVV LTASFEEKFL NVPSEALVYT MKGDQKYFPV FDEAGKLLPN FIFVTNIESK DPAQIISGNE KVVRPRLADA EFFFNTDKKH TLESRLPSLE TVLFQQQLGT LKDKVNRISA LAAFIAEQTG ANAVDAARAG LLSKTDLMTN MVMEFTDTQG TMGMHYARLD GETEAVAVAM EEQYKPKFSG DTVPSAGVSC AVALADKLDT LVGIFGIGQA PKGAADPFAL RRAAIGVLRI IVENKLPLDL VDLIAKAQAL HGTNLSNANA SDEVLEFLMA RFRAWYQDKG IGVDVILAVL ARRPTRPADF DSRINAVSHF RSLEASSALA AANKRVSNIL AKVEGALPTT INANLLTEAA EQALAAKLNE LQPLLAPLFA NADYQQALTL LAGLRESVDQ FFEDVMVMAD DEALKNNRLA LLNNLREQFL HVADISLLQ
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