Gene Shel_28120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_28120 
Symbol 
ID8396700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp3116612 
End bp3117469 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content59% 
IMG OID644987551 
Productphosphate ABC transporter membrane protein 
Protein accessionYP_003145151 
Protein GI257065479 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0581] ABC-type phosphate transport system, permease component 
TIGRFAM ID[TIGR00974] phosphate ABC transporter, permease protein PstA 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCGA ATACCTTCAA CGCCCGCAAG GCCAAAAACG CGATGCTGAA AGGCCTCGTC 
TATGCGGGCG GCATCCTTGT GTGCCTGGTG CTTCTGTTCA TCATCGCCTA CATCTTCTAT
CGGGGCTTCC CCGGCATCAC GTCGGAGCTC CTGACGACGG AGAGCAGCTA TGTCCACGAC
ACCATCGGCA TCCTGCCGAA CATCCTGAAC ACCCTGTACA TCGTACTGGT CGCCATGGTC
ATCGTAATCC CCTTGGGCGT GTGCGCCGCG GTGTATCTGA ACGAGTACGC CAAGAACTAC
CGTCTTGTCA GACTGATCGG ATTCGCCGTA GAAACCCTCA CCGGCATCCC CTCGGTCATC
TTCGGCCTGG TAGGCATGCT GGCGTTCATC CAACTGATGG GCCTGAAAGC AGGCATCCTG
GTCGGCGGCC TCACGCTGGT GGTCATGGTT CTGCCCACCA TCATCAGCAA CACGCTGGAA
AGCCTGAAAA CCGTTCCCGA CTCCTACCGC GAAGGTGCGC TGGCATTGGG GAGCGGCAAG
TGGCACATGA TCCGTACTGT GGTGCTGCCC AGCTCCATCG ACGGCATCGT TACCGGGTGC
ATCCTGGCAG TCGGCCGCAT CGTCGGCGAG TCCGCCGCGC TGCTGTACAC GGCAGGTTTC
GGCCTGATCC TCAACAGCTT CATGACGGCG CTGCAGTCGT CGAGCGCCAC GCTGACCGTC
GCCCTGTACG TCTACGCGAC GGAACGAGGA GAGTTGAACG TCGCATTCTC CATCGCGACC
ATCCTACTGA TCCTGACCCT GCTGCTCAAC CTAGCCGCCA ACGTATCTGC TTCCAAGCTC
AACAACAAGG AGAAATAG
 
Protein sequence
MQANTFNARK AKNAMLKGLV YAGGILVCLV LLFIIAYIFY RGFPGITSEL LTTESSYVHD 
TIGILPNILN TLYIVLVAMV IVIPLGVCAA VYLNEYAKNY RLVRLIGFAV ETLTGIPSVI
FGLVGMLAFI QLMGLKAGIL VGGLTLVVMV LPTIISNTLE SLKTVPDSYR EGALALGSGK
WHMIRTVVLP SSIDGIVTGC ILAVGRIVGE SAALLYTAGF GLILNSFMTA LQSSSATLTV
ALYVYATERG ELNVAFSIAT ILLILTLLLN LAANVSASKL NNKEK