Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_28040 |
Symbol | |
ID | 8396692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 3104667 |
End bp | 3105896 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644987543 |
Product | hypothetical protein |
Protein accession | YP_003145144 |
Protein GI | 257065472 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.803673 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCTGCA TGAGATGCGG CAATCCAGTT GCCGATAATG CGAAGTTCTG CACCAAGTGC GGATGTCCGG TCGAGTCCAC CGCAAGCACC GCGCCTGCGG AGGCAGCCGC GCCTGCAGAG CCGGCAGCGG TCGAATCTAC AGTCGAGCCT GAAGCCGCGG TCGAACTCAC AACCGAGGCC GAGATCGAAA CCGTAGCAGT CGAGCCTGAA CCTGAGCCCG CGACCGAACC CGTTGCGCCT GAACCCGCTC TCGGCCAGGC GCCTGCATCC GAATACGCGG AGGCTGCGCT CGAGTCCCTG TCTGCCGGCG GTTCCGCAAC GGCTCCTGTG GAGCCTTCGG CTGCGCCCGT GAACAACGCA CCGCAGATGC AAGCGCCTCC GTTTGCTCCG GTTCCTGCGG ATGTTGCAGC CAGCAACGTA ACGCCGCCTG CAGCCAAGCC GAAAAAAGGA CTGATGATCG GGATTGTCGC AGGCGTGGCA GCAGTTGTCC TGATCGGGGC GTTTCTGCTG ATACCTCGCC TGATCGGCGG ATCGTCCGGT CCGGTGTACG TGCCCGTGAA GTATTCGCTT GATCTGGACG GCGACGGCAA AGTGAGCACC GTCGGCGAAT ACGAGGTGAC GATCGAACGC GCCGACGACG GCACGATTAC ACACTGGACG CGCAACGCAA TGCTGATCGA AGGGGAAACG CTTACCATCG ACCGAGATTA TACCTATGAG GACGGATTCC CAACGACGGT TGACAGCACA TCTCAGTTCT CTGGTGACGA GACGTCGCAG ACGAACCCCA TGGAGACCAC GCACGAGATA AACGACGAGG GTTTCGTGAC CGCCGAGACG TGGGAGGGCA GCGACTGGGT CGAGAGCTAT CGGTACACGT ATGACGACGA AGGCCAGCTC AAGAGCTCTA AAATGGAATC CGAGATGGAT GGCGAAAGCA ATTATCAGCT GTCTAAAAAG TACAGAGGCG GCATGCTGAC CACGATGAAC GCCGGCGATG GCGATTATTC GTCTAAGGTG AAATACGACT GGGATGTCGA AGCGGGCACC ATGAAGCAGA CCGATGATTT AGGGGAGTAC GAGTTCGACG TCCAGACGGA TGACGCTGGC AACATCGTGT CGATGGTTGG TGGGGAAGAG GACGCCAGCA TCACCGTCGA ATGGGTGAAA GTGGACAAGC CGTGCGGCTA TGCCCAGTTT GAAAGCCTGA ACAAGACTCC GTGGATGTAA
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Protein sequence | MFCMRCGNPV ADNAKFCTKC GCPVESTAST APAEAAAPAE PAAVESTVEP EAAVELTTEA EIETVAVEPE PEPATEPVAP EPALGQAPAS EYAEAALESL SAGGSATAPV EPSAAPVNNA PQMQAPPFAP VPADVAASNV TPPAAKPKKG LMIGIVAGVA AVVLIGAFLL IPRLIGGSSG PVYVPVKYSL DLDGDGKVST VGEYEVTIER ADDGTITHWT RNAMLIEGET LTIDRDYTYE DGFPTTVDST SQFSGDETSQ TNPMETTHEI NDEGFVTAET WEGSDWVESY RYTYDDEGQL KSSKMESEMD GESNYQLSKK YRGGMLTTMN AGDGDYSSKV KYDWDVEAGT MKQTDDLGEY EFDVQTDDAG NIVSMVGGEE DASITVEWVK VDKPCGYAQF ESLNKTPWM
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