Gene Shel_28040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_28040 
Symbol 
ID8396692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp3104667 
End bp3105896 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content59% 
IMG OID644987543 
Producthypothetical protein 
Protein accessionYP_003145144 
Protein GI257065472 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.803673 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTGCA TGAGATGCGG CAATCCAGTT GCCGATAATG CGAAGTTCTG CACCAAGTGC 
GGATGTCCGG TCGAGTCCAC CGCAAGCACC GCGCCTGCGG AGGCAGCCGC GCCTGCAGAG
CCGGCAGCGG TCGAATCTAC AGTCGAGCCT GAAGCCGCGG TCGAACTCAC AACCGAGGCC
GAGATCGAAA CCGTAGCAGT CGAGCCTGAA CCTGAGCCCG CGACCGAACC CGTTGCGCCT
GAACCCGCTC TCGGCCAGGC GCCTGCATCC GAATACGCGG AGGCTGCGCT CGAGTCCCTG
TCTGCCGGCG GTTCCGCAAC GGCTCCTGTG GAGCCTTCGG CTGCGCCCGT GAACAACGCA
CCGCAGATGC AAGCGCCTCC GTTTGCTCCG GTTCCTGCGG ATGTTGCAGC CAGCAACGTA
ACGCCGCCTG CAGCCAAGCC GAAAAAAGGA CTGATGATCG GGATTGTCGC AGGCGTGGCA
GCAGTTGTCC TGATCGGGGC GTTTCTGCTG ATACCTCGCC TGATCGGCGG ATCGTCCGGT
CCGGTGTACG TGCCCGTGAA GTATTCGCTT GATCTGGACG GCGACGGCAA AGTGAGCACC
GTCGGCGAAT ACGAGGTGAC GATCGAACGC GCCGACGACG GCACGATTAC ACACTGGACG
CGCAACGCAA TGCTGATCGA AGGGGAAACG CTTACCATCG ACCGAGATTA TACCTATGAG
GACGGATTCC CAACGACGGT TGACAGCACA TCTCAGTTCT CTGGTGACGA GACGTCGCAG
ACGAACCCCA TGGAGACCAC GCACGAGATA AACGACGAGG GTTTCGTGAC CGCCGAGACG
TGGGAGGGCA GCGACTGGGT CGAGAGCTAT CGGTACACGT ATGACGACGA AGGCCAGCTC
AAGAGCTCTA AAATGGAATC CGAGATGGAT GGCGAAAGCA ATTATCAGCT GTCTAAAAAG
TACAGAGGCG GCATGCTGAC CACGATGAAC GCCGGCGATG GCGATTATTC GTCTAAGGTG
AAATACGACT GGGATGTCGA AGCGGGCACC ATGAAGCAGA CCGATGATTT AGGGGAGTAC
GAGTTCGACG TCCAGACGGA TGACGCTGGC AACATCGTGT CGATGGTTGG TGGGGAAGAG
GACGCCAGCA TCACCGTCGA ATGGGTGAAA GTGGACAAGC CGTGCGGCTA TGCCCAGTTT
GAAAGCCTGA ACAAGACTCC GTGGATGTAA
 
Protein sequence
MFCMRCGNPV ADNAKFCTKC GCPVESTAST APAEAAAPAE PAAVESTVEP EAAVELTTEA 
EIETVAVEPE PEPATEPVAP EPALGQAPAS EYAEAALESL SAGGSATAPV EPSAAPVNNA
PQMQAPPFAP VPADVAASNV TPPAAKPKKG LMIGIVAGVA AVVLIGAFLL IPRLIGGSSG
PVYVPVKYSL DLDGDGKVST VGEYEVTIER ADDGTITHWT RNAMLIEGET LTIDRDYTYE
DGFPTTVDST SQFSGDETSQ TNPMETTHEI NDEGFVTAET WEGSDWVESY RYTYDDEGQL
KSSKMESEMD GESNYQLSKK YRGGMLTTMN AGDGDYSSKV KYDWDVEAGT MKQTDDLGEY
EFDVQTDDAG NIVSMVGGEE DASITVEWVK VDKPCGYAQF ESLNKTPWM