Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_28000 |
Symbol | |
ID | 8396688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 3099478 |
End bp | 3100794 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644987539 |
Product | parvulin-like peptidyl-prolyl isomerase |
Protein accession | YP_003145140 |
Protein GI | 257065468 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGCTA CTCGTATCAT CAAACCGATG GCCGTGTTCG CCATCGCCTG CGCCATGGCC GCCATGATTG CGGGCTGCTC CGGCAACCAG GAAGAGGCGA CGTACGATCA GCTCGACGTG TCCGACACCA CCGGCGGCGT GGCCGCTACG GTCAACGGCG TCGAAATCGG CGAGAATTCC ATCACCGGTT ACATCGAGGA CTTCCGCTCG CTGAACGGCC TGACCGAAGA CGCAGCTTGG GCCGAATGGA TGGTCAATGC CGGCTACACC GCCGAGGATC TTCGTAGCGA AGTCATCAAC TACTACGTTA ATCAGACGCT CGTTCGCCAG GCTGCCGAGG AGAACGGCGT GACGGTCGAT TCTGCGGAAA TCGATTCGCA GGTCGAAACC ATGAAGAGCA ACTACGAGGA CGAAGCCGCC TGGGATGAGG CGCTGCAGTC CGTTGGTATC CAGAGCGAAG AGGTGTACCG CTCTGAACTG GAGCTTTACG CCATGGAGCA GGCGCTTGTT CCCATCGTGG CAGGCGACGC CGAGCCCTCT GAAGAGGATC TGCTCATGTA CGCGCAGATG TACGGCCCTG CCTATGACGG CGCCAAGAAG TCCAGCCACA TCTTGTTCGC AGCTGACGAC GAAGCCACCG CGCAGCAGGT GCTCGACCAG ATCAACAACG GCGAGATCGA CTTCGCCGAT GCTGCTGCGC AATACTCCAT CGACACCGCA TCTGCAGCTG ATGGCGGCAA CGTGGGCTGG GACGCCTTGA ACAGCTTCGT GACCGAATAC ACCGATGCCC TTTCTAATCT TGAAGAAGGC CAGGTCAGCG GTCTTGTCAC CTCCGACTAC GGCATTCATA TCATCAAGTG CACCGAGGTC TTCACCTGCC CCGAAGAGGT CACCTCCATC GAAGAGCTGC CCCAGGAGCT GCAGGACCTG ATCATGGACT ACGTTTCTTC CAGCGCTCAG GACATGGCAT ACCAGGAATG GTTCTCCTCT TATCAGGAGG GCGCCGACAT CGTGATTAAC GACATGCCCG AGGGTCTGCC CTACGACGTC GACACCTCTG AGGCCGAGGC CGCCATGGCC GCCAGCGATA CCGGTGCCGA AAGCGCCGAT ACCGCCACCG AAGAGGCTCC TTCCGATGGT GCCGCGGCTG ACGAATCCGC TGATGACGTT GATGCCGCTA TCGAGGAAAC CGTGAACGGC GCGGCTGCCG AAGAGTCCGG CGATCCTTCC GCGAGCACGG TTGACGAAAC CGCCGAAGGC AGCCCGGCCG ATCAGCCTGC CGAAGAGGAG ACCGCTGACG CTCCCACCGC GAACTAG
|
Protein sequence | MSATRIIKPM AVFAIACAMA AMIAGCSGNQ EEATYDQLDV SDTTGGVAAT VNGVEIGENS ITGYIEDFRS LNGLTEDAAW AEWMVNAGYT AEDLRSEVIN YYVNQTLVRQ AAEENGVTVD SAEIDSQVET MKSNYEDEAA WDEALQSVGI QSEEVYRSEL ELYAMEQALV PIVAGDAEPS EEDLLMYAQM YGPAYDGAKK SSHILFAADD EATAQQVLDQ INNGEIDFAD AAAQYSIDTA SAADGGNVGW DALNSFVTEY TDALSNLEEG QVSGLVTSDY GIHIIKCTEV FTCPEEVTSI EELPQELQDL IMDYVSSSAQ DMAYQEWFSS YQEGADIVIN DMPEGLPYDV DTSEAEAAMA ASDTGAESAD TATEEAPSDG AAADESADDV DAAIEETVNG AAAEESGDPS ASTVDETAEG SPADQPAEEE TADAPTAN
|
| |