Gene Shel_27930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_27930 
Symbol 
ID8396681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp3093098 
End bp3093586 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content60% 
IMG OID644987532 
Producthypothetical protein 
Protein accessionYP_003145135 
Protein GI257065463 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00195826 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGACT TCGAAGTCGA CGCGCAATAT AGCAAGGATC CCGAGATCGA CGAGACGCTC 
AACGCCCTTA TCGAAATGGC CTTCGGCCTG GCCCAGGAAG ACCTGGAAAA GGGCGAGGTC
CTGAGCCCGT TCACCCTGAC CCTGTTCGGC GAGAACGTTT CCCAGGACTT CTTCACCGGC
GAAACCCCCG ACGAGTTCCG CGTGGCTGCA GAACTGCACG TGGTGCGCCA GGCCAACATC
GCCGACGGGT ATGCGTTCTG CTACGACGGC TATCTGGAAA CCAACCAGGG CGTCATGGAC
GCCATCATCG TCGAAGCCGC CATGAAGGAT GACCTGGCCG GCGTCGTGTA CGGCCTGCTG
TACGAAGAGC ATGACGACAA GCTGGTCTTC GAGGAGAAGC CGCGTTTCAT CGATGTCATT
TCCAGCTTCC TGGCCGAGAT CGAGCCCGAA GAAGACGAAG CGGAAGACGA CGAGACCGAC
GAGGACTAA
 
Protein sequence
MADFEVDAQY SKDPEIDETL NALIEMAFGL AQEDLEKGEV LSPFTLTLFG ENVSQDFFTG 
ETPDEFRVAA ELHVVRQANI ADGYAFCYDG YLETNQGVMD AIIVEAAMKD DLAGVVYGLL
YEEHDDKLVF EEKPRFIDVI SSFLAEIEPE EDEAEDDETD ED